Gene : Cagra.13424s0008 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24326:SF136 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-54-RELATED Genomic Order:  8
Name:  ? Cagra.13424s0008 Secondary Identifier:  ? PAC:28897936
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13424s0008 0.5kb upstream 0.5kb upstream 1717 true Scaffold13424: 25026-26742 Capsella grandiflora
Cagra.13424s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold13424: 26243-26742 Capsella grandiflora
Cagra.13424s0008 0.5kb downstream 0.5kb downstream 1717 true Scaffold13424: 24526-26242 Capsella grandiflora
Cagra.13424s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold13424: 24526-25025 Capsella grandiflora
Cagra.13424s0008 1.0kb upstream 1.0kb upstream 2217 true Scaffold13424: 25026-27242 Capsella grandiflora
Cagra.13424s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold13424: 26243-27242 Capsella grandiflora
Cagra.13424s0008 1.0kb downstream 1.0kb downstream 2217 true Scaffold13424: 24026-26242 Capsella grandiflora
Cagra.13424s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold13424: 24026-25025 Capsella grandiflora
Cagra.13424s0008 2.0kb upstream 2.0kb upstream 3217 true Scaffold13424: 25026-28242 Capsella grandiflora
Cagra.13424s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold13424: 26243-28242 Capsella grandiflora
Cagra.13424s0008 2.0kb downstream 2.0kb downstream 3217 true Scaffold13424: 23026-26242 Capsella grandiflora
Cagra.13424s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold13424: 23026-25025 Capsella grandiflora
Cagra.13424s0008 5.0kb upstream 5.0kb upstream 6217 true Scaffold13424: 25026-31242 Capsella grandiflora
Cagra.13424s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold13424: 26243-31242 Capsella grandiflora
Cagra.13424s0008 5.0kb downstream 5.0kb downstream 6217 true Scaffold13424: 20026-26242 Capsella grandiflora
Cagra.13424s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold13424: 20026-25025 Capsella grandiflora
Cagra.13424s0008 10.0kb upstream 10.0kb upstream 11217 true Scaffold13424: 25026-36242 Capsella grandiflora
Cagra.13424s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold13424: 26243-36242 Capsella grandiflora
Cagra.13424s0008 10.0kb downstream 10.0kb downstream 11217 true Scaffold13424: 15026-26242 Capsella grandiflora
Cagra.13424s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold13424: 15026-25025 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375323 5261 Brassicaceae View MSA
123800927 5264 Brassicales-Malvales View MSA
124298282 5266 SBM View MSA
124149961 5268 Malvidae View MSA
124070886 5270 Rosid View MSA
123751160 5271 Pentapetalae View MSA
122797641 5272 Eudicot View MSA
122048587 5273 Angiosperm View MSA
121351579 5274 Embryophyte View MSA
123382235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain