Gene : Cagra.13153s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12565:SF154 - TRANSCRIPTION FACTOR BHLH62-RELATED Genomic Order:  1
Name:  ? Cagra.13153s0001 Secondary Identifier:  ? PAC:28911675
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13153s0001 0.5kb upstream 0.5kb upstream 3376 true Scaffold13153: 766-4141 Capsella grandiflora
Cagra.13153s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold13153: 3642-4141 Capsella grandiflora
Cagra.13153s0001 0.5kb downstream 0.5kb downstream 3376 true Scaffold13153: 266-3641 Capsella grandiflora
Cagra.13153s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold13153: 266-765 Capsella grandiflora
Cagra.13153s0001 1.0kb upstream 1.0kb upstream 3876 true Scaffold13153: 766-4641 Capsella grandiflora
Cagra.13153s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold13153: 3642-4641 Capsella grandiflora
Cagra.13153s0001 1.0kb downstream 1.0kb downstream 3641 true Scaffold13153: 1-3641 Capsella grandiflora
Cagra.13153s0001 1.0kb downstream 1.0kb downstream 765 false Scaffold13153: 1-765 Capsella grandiflora
Cagra.13153s0001 2.0kb upstream 2.0kb upstream 4876 true Scaffold13153: 766-5641 Capsella grandiflora
Cagra.13153s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold13153: 3642-5641 Capsella grandiflora
Cagra.13153s0001 2.0kb downstream 2.0kb downstream 3641 true Scaffold13153: 1-3641 Capsella grandiflora
Cagra.13153s0001 2.0kb downstream 2.0kb downstream 765 false Scaffold13153: 1-765 Capsella grandiflora
Cagra.13153s0001 5.0kb upstream 5.0kb upstream 7876 true Scaffold13153: 766-8641 Capsella grandiflora
Cagra.13153s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold13153: 3642-8641 Capsella grandiflora
Cagra.13153s0001 5.0kb downstream 5.0kb downstream 3641 true Scaffold13153: 1-3641 Capsella grandiflora
Cagra.13153s0001 5.0kb downstream 5.0kb downstream 765 false Scaffold13153: 1-765 Capsella grandiflora
Cagra.13153s0001 10.0kb upstream 10.0kb upstream 8583 true Scaffold13153: 766-9348 Capsella grandiflora
Cagra.13153s0001 10.0kb upstream 10.0kb upstream 5707 false Scaffold13153: 3642-9348 Capsella grandiflora
Cagra.13153s0001 10.0kb downstream 10.0kb downstream 3641 true Scaffold13153: 1-3641 Capsella grandiflora
Cagra.13153s0001 10.0kb downstream 10.0kb downstream 765 false Scaffold13153: 1-765 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380143 5261 Brassicaceae View MSA
123836206 5264 Brassicales-Malvales View MSA
124341093 5266 SBM View MSA
124253328 5268 Malvidae View MSA
124071713 5270 Rosid View MSA
123752095 5271 Pentapetalae View MSA
122794860 5272 Eudicot View MSA
122048155 5273 Angiosperm View MSA
121350038 5274 Embryophyte View MSA
123381551 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain