Gene : Cagra.13389s0016 C. grandiflora v1.1
Defline:  (1 of 2) PF02068 - Plant PEC family metallothionein (Metallothio_PEC) Genomic Order:  16
Name:  ? Cagra.13389s0016 Secondary Identifier:  ? PAC:28907491
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13389s0016 0.5kb upstream 0.5kb upstream 864 true Scaffold13389: 60505-61368 Capsella grandiflora
Cagra.13389s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold13389: 60869-61368 Capsella grandiflora
Cagra.13389s0016 0.5kb downstream 0.5kb downstream 864 true Scaffold13389: 60005-60868 Capsella grandiflora
Cagra.13389s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold13389: 60005-60504 Capsella grandiflora
Cagra.13389s0016 1.0kb upstream 1.0kb upstream 1364 true Scaffold13389: 60505-61868 Capsella grandiflora
Cagra.13389s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold13389: 60869-61868 Capsella grandiflora
Cagra.13389s0016 1.0kb downstream 1.0kb downstream 1364 true Scaffold13389: 59505-60868 Capsella grandiflora
Cagra.13389s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold13389: 59505-60504 Capsella grandiflora
Cagra.13389s0016 2.0kb upstream 2.0kb upstream 2364 true Scaffold13389: 60505-62868 Capsella grandiflora
Cagra.13389s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold13389: 60869-62868 Capsella grandiflora
Cagra.13389s0016 2.0kb downstream 2.0kb downstream 2364 true Scaffold13389: 58505-60868 Capsella grandiflora
Cagra.13389s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold13389: 58505-60504 Capsella grandiflora
Cagra.13389s0016 5.0kb upstream 5.0kb upstream 5364 true Scaffold13389: 60505-65868 Capsella grandiflora
Cagra.13389s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold13389: 60869-65868 Capsella grandiflora
Cagra.13389s0016 5.0kb downstream 5.0kb downstream 5364 true Scaffold13389: 55505-60868 Capsella grandiflora
Cagra.13389s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold13389: 55505-60504 Capsella grandiflora
Cagra.13389s0016 10.0kb upstream 10.0kb upstream 10364 true Scaffold13389: 60505-70868 Capsella grandiflora
Cagra.13389s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold13389: 60869-70868 Capsella grandiflora
Cagra.13389s0016 10.0kb downstream 10.0kb downstream 10364 true Scaffold13389: 50505-60868 Capsella grandiflora
Cagra.13389s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold13389: 50505-60504 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121496024 5273 Angiosperm Singleton cluster - no MSA
122332505 5261 Brassicaceae Singleton cluster - no MSA
123773569 5264 Brassicales-Malvales Singleton cluster - no MSA
124272047 5266 SBM Singleton cluster - no MSA
124127946 5268 Malvidae Singleton cluster - no MSA
123856730 5270 Rosid Singleton cluster - no MSA
123442621 5271 Pentapetalae Singleton cluster - no MSA
122478194 5272 Eudicot Singleton cluster - no MSA
120769385 5274 Embryophyte Singleton cluster - no MSA
122811753 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain