Gene : Cagra.10540s0001 C. grandiflora v1.1
Defline:  (1 of 7) PF04780//PF04781 - Protein of unknown function (DUF629) (DUF629) // Protein of unknown function (DUF627) (DUF627) Genomic Order:  1
Name:  ? Cagra.10540s0001 Secondary Identifier:  ? PAC:28909577
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10540s0001 0.5kb upstream 0.5kb upstream 2577 true Scaffold10540: 1-2577 Capsella grandiflora
Cagra.10540s0001 0.5kb upstream 0.5kb upstream 246 false Scaffold10540: 1-246 Capsella grandiflora
Cagra.10540s0001 0.5kb downstream 0.5kb downstream 2831 true Scaffold10540: 247-3077 Capsella grandiflora
Cagra.10540s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold10540: 2578-3077 Capsella grandiflora
Cagra.10540s0001 1.0kb upstream 1.0kb upstream 2577 true Scaffold10540: 1-2577 Capsella grandiflora
Cagra.10540s0001 1.0kb upstream 1.0kb upstream 246 false Scaffold10540: 1-246 Capsella grandiflora
Cagra.10540s0001 1.0kb downstream 1.0kb downstream 3331 true Scaffold10540: 247-3577 Capsella grandiflora
Cagra.10540s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold10540: 2578-3577 Capsella grandiflora
Cagra.10540s0001 2.0kb upstream 2.0kb upstream 2577 true Scaffold10540: 1-2577 Capsella grandiflora
Cagra.10540s0001 2.0kb upstream 2.0kb upstream 246 false Scaffold10540: 1-246 Capsella grandiflora
Cagra.10540s0001 2.0kb downstream 2.0kb downstream 4331 true Scaffold10540: 247-4577 Capsella grandiflora
Cagra.10540s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold10540: 2578-4577 Capsella grandiflora
Cagra.10540s0001 5.0kb upstream 5.0kb upstream 2577 true Scaffold10540: 1-2577 Capsella grandiflora
Cagra.10540s0001 5.0kb upstream 5.0kb upstream 246 false Scaffold10540: 1-246 Capsella grandiflora
Cagra.10540s0001 5.0kb downstream 5.0kb downstream 7331 true Scaffold10540: 247-7577 Capsella grandiflora
Cagra.10540s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold10540: 2578-7577 Capsella grandiflora
Cagra.10540s0001 10.0kb upstream 10.0kb upstream 2577 true Scaffold10540: 1-2577 Capsella grandiflora
Cagra.10540s0001 10.0kb upstream 10.0kb upstream 246 false Scaffold10540: 1-246 Capsella grandiflora
Cagra.10540s0001 10.0kb downstream 10.0kb downstream 7627 true Scaffold10540: 247-7873 Capsella grandiflora
Cagra.10540s0001 10.0kb downstream 10.0kb downstream 5296 false Scaffold10540: 2578-7873 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792135 5273 Angiosperm View MSA
122381709 5261 Brassicaceae View MSA
123803390 5264 Brassicales-Malvales View MSA
124300503 5266 SBM View MSA
124151676 5268 Malvidae View MSA
123877064 5270 Rosid View MSA
123460648 5271 Pentapetalae View MSA
122796558 5272 Eudicot View MSA
121063386 5274 Embryophyte View MSA
123103139 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain