Gene : Cagra.23907s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11206:SF152 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  1
Name:  ? Cagra.23907s0001 Secondary Identifier:  ? PAC:28913586
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.23907s0001 0.5kb upstream 0.5kb upstream 2983 true Scaffold23907: 3621-6603 Capsella grandiflora
Cagra.23907s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold23907: 3621-4120 Capsella grandiflora
Cagra.23907s0001 0.5kb downstream 0.5kb downstream 2983 true Scaffold23907: 4121-7103 Capsella grandiflora
Cagra.23907s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold23907: 6604-7103 Capsella grandiflora
Cagra.23907s0001 1.0kb upstream 1.0kb upstream 3483 true Scaffold23907: 3121-6603 Capsella grandiflora
Cagra.23907s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold23907: 3121-4120 Capsella grandiflora
Cagra.23907s0001 1.0kb downstream 1.0kb downstream 3483 true Scaffold23907: 4121-7603 Capsella grandiflora
Cagra.23907s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold23907: 6604-7603 Capsella grandiflora
Cagra.23907s0001 2.0kb upstream 2.0kb upstream 4483 true Scaffold23907: 2121-6603 Capsella grandiflora
Cagra.23907s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold23907: 2121-4120 Capsella grandiflora
Cagra.23907s0001 2.0kb downstream 2.0kb downstream 4483 true Scaffold23907: 4121-8603 Capsella grandiflora
Cagra.23907s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold23907: 6604-8603 Capsella grandiflora
Cagra.23907s0001 5.0kb upstream 5.0kb upstream 6603 true Scaffold23907: 1-6603 Capsella grandiflora
Cagra.23907s0001 5.0kb upstream 5.0kb upstream 4120 false Scaffold23907: 1-4120 Capsella grandiflora
Cagra.23907s0001 5.0kb downstream 5.0kb downstream 7483 true Scaffold23907: 4121-11603 Capsella grandiflora
Cagra.23907s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold23907: 6604-11603 Capsella grandiflora
Cagra.23907s0001 10.0kb upstream 10.0kb upstream 6603 true Scaffold23907: 1-6603 Capsella grandiflora
Cagra.23907s0001 10.0kb upstream 10.0kb upstream 4120 false Scaffold23907: 1-4120 Capsella grandiflora
Cagra.23907s0001 10.0kb downstream 10.0kb downstream 12483 true Scaffold23907: 4121-16603 Capsella grandiflora
Cagra.23907s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold23907: 6604-16603 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377908 5261 Brassicaceae View MSA
123829113 5264 Brassicales-Malvales View MSA
124343347 5266 SBM View MSA
124246128 5268 Malvidae View MSA
124074534 5270 Rosid View MSA
123753109 5271 Pentapetalae View MSA
122797339 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain