Gene : Cagra.23907s0006 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10869:SF55 - OXOGLUTARATE/IRON-DEPENDENT OXYGENASE Genomic Order:  6
Name:  ? Cagra.23907s0006 Secondary Identifier:  ? PAC:28913587
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.23907s0006 0.5kb upstream 0.5kb upstream 2456 true Scaffold23907: 27044-29499 Capsella grandiflora
Cagra.23907s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold23907: 29000-29499 Capsella grandiflora
Cagra.23907s0006 0.5kb downstream 0.5kb downstream 2456 true Scaffold23907: 26544-28999 Capsella grandiflora
Cagra.23907s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold23907: 26544-27043 Capsella grandiflora
Cagra.23907s0006 1.0kb upstream 1.0kb upstream 2956 true Scaffold23907: 27044-29999 Capsella grandiflora
Cagra.23907s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold23907: 29000-29999 Capsella grandiflora
Cagra.23907s0006 1.0kb downstream 1.0kb downstream 2956 true Scaffold23907: 26044-28999 Capsella grandiflora
Cagra.23907s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold23907: 26044-27043 Capsella grandiflora
Cagra.23907s0006 2.0kb upstream 2.0kb upstream 3956 true Scaffold23907: 27044-30999 Capsella grandiflora
Cagra.23907s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold23907: 29000-30999 Capsella grandiflora
Cagra.23907s0006 2.0kb downstream 2.0kb downstream 3956 true Scaffold23907: 25044-28999 Capsella grandiflora
Cagra.23907s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold23907: 25044-27043 Capsella grandiflora
Cagra.23907s0006 5.0kb upstream 5.0kb upstream 6956 true Scaffold23907: 27044-33999 Capsella grandiflora
Cagra.23907s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold23907: 29000-33999 Capsella grandiflora
Cagra.23907s0006 5.0kb downstream 5.0kb downstream 6956 true Scaffold23907: 22044-28999 Capsella grandiflora
Cagra.23907s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold23907: 22044-27043 Capsella grandiflora
Cagra.23907s0006 10.0kb upstream 10.0kb upstream 11956 true Scaffold23907: 27044-38999 Capsella grandiflora
Cagra.23907s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold23907: 29000-38999 Capsella grandiflora
Cagra.23907s0006 10.0kb downstream 10.0kb downstream 11956 true Scaffold23907: 17044-28999 Capsella grandiflora
Cagra.23907s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold23907: 17044-27043 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791816 5273 Angiosperm View MSA
122367169 5261 Brassicaceae View MSA
123839423 5264 Brassicales-Malvales View MSA
124336549 5266 SBM View MSA
124240975 5268 Malvidae View MSA
124066883 5270 Rosid View MSA
123739634 5271 Pentapetalae View MSA
122794132 5272 Eudicot View MSA
121063105 5274 Embryophyte View MSA
123102888 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain