Gene : Cagra.21079s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Genomic Order:  1
Name:  ? Cagra.21079s0001 Secondary Identifier:  ? PAC:28908477
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.21079s0001 0.5kb upstream 0.5kb upstream 3627 true Scaffold21079: 383-4009 Capsella grandiflora
Cagra.21079s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold21079: 383-882 Capsella grandiflora
Cagra.21079s0001 0.5kb downstream 0.5kb downstream 3627 true Scaffold21079: 883-4509 Capsella grandiflora
Cagra.21079s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold21079: 4010-4509 Capsella grandiflora
Cagra.21079s0001 1.0kb upstream 1.0kb upstream 4009 true Scaffold21079: 1-4009 Capsella grandiflora
Cagra.21079s0001 1.0kb upstream 1.0kb upstream 882 false Scaffold21079: 1-882 Capsella grandiflora
Cagra.21079s0001 1.0kb downstream 1.0kb downstream 4127 true Scaffold21079: 883-5009 Capsella grandiflora
Cagra.21079s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold21079: 4010-5009 Capsella grandiflora
Cagra.21079s0001 2.0kb upstream 2.0kb upstream 4009 true Scaffold21079: 1-4009 Capsella grandiflora
Cagra.21079s0001 2.0kb upstream 2.0kb upstream 882 false Scaffold21079: 1-882 Capsella grandiflora
Cagra.21079s0001 2.0kb downstream 2.0kb downstream 5127 true Scaffold21079: 883-6009 Capsella grandiflora
Cagra.21079s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold21079: 4010-6009 Capsella grandiflora
Cagra.21079s0001 5.0kb upstream 5.0kb upstream 4009 true Scaffold21079: 1-4009 Capsella grandiflora
Cagra.21079s0001 5.0kb upstream 5.0kb upstream 882 false Scaffold21079: 1-882 Capsella grandiflora
Cagra.21079s0001 5.0kb downstream 5.0kb downstream 8127 true Scaffold21079: 883-9009 Capsella grandiflora
Cagra.21079s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold21079: 4010-9009 Capsella grandiflora
Cagra.21079s0001 10.0kb upstream 10.0kb upstream 4009 true Scaffold21079: 1-4009 Capsella grandiflora
Cagra.21079s0001 10.0kb upstream 10.0kb upstream 882 false Scaffold21079: 1-882 Capsella grandiflora
Cagra.21079s0001 10.0kb downstream 10.0kb downstream 13127 true Scaffold21079: 883-14009 Capsella grandiflora
Cagra.21079s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold21079: 4010-14009 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364573 5261 Brassicaceae View MSA
123838020 5264 Brassicales-Malvales View MSA
124349939 5266 SBM View MSA
124253433 5268 Malvidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain