Gene : Cagra.20971s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR14155:SF183 - RING/U-BOX SUPERFAMILY PROTEIN Genomic Order:  1
Name:  ? Cagra.20971s0001 Secondary Identifier:  ? PAC:28909969
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.20971s0001 0.5kb upstream 0.5kb upstream 1022 true Scaffold20971: 621-1642 Capsella grandiflora
Cagra.20971s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold20971: 1143-1642 Capsella grandiflora
Cagra.20971s0001 0.5kb downstream 0.5kb downstream 1022 true Scaffold20971: 121-1142 Capsella grandiflora
Cagra.20971s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold20971: 121-620 Capsella grandiflora
Cagra.20971s0001 1.0kb upstream 1.0kb upstream 1522 true Scaffold20971: 621-2142 Capsella grandiflora
Cagra.20971s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold20971: 1143-2142 Capsella grandiflora
Cagra.20971s0001 1.0kb downstream 1.0kb downstream 1142 true Scaffold20971: 1-1142 Capsella grandiflora
Cagra.20971s0001 1.0kb downstream 1.0kb downstream 620 false Scaffold20971: 1-620 Capsella grandiflora
Cagra.20971s0001 2.0kb upstream 2.0kb upstream 1543 true Scaffold20971: 621-2163 Capsella grandiflora
Cagra.20971s0001 2.0kb upstream 2.0kb upstream 1021 false Scaffold20971: 1143-2163 Capsella grandiflora
Cagra.20971s0001 2.0kb downstream 2.0kb downstream 1142 true Scaffold20971: 1-1142 Capsella grandiflora
Cagra.20971s0001 2.0kb downstream 2.0kb downstream 620 false Scaffold20971: 1-620 Capsella grandiflora
Cagra.20971s0001 5.0kb upstream 5.0kb upstream 1543 true Scaffold20971: 621-2163 Capsella grandiflora
Cagra.20971s0001 5.0kb upstream 5.0kb upstream 1021 false Scaffold20971: 1143-2163 Capsella grandiflora
Cagra.20971s0001 5.0kb downstream 5.0kb downstream 1142 true Scaffold20971: 1-1142 Capsella grandiflora
Cagra.20971s0001 5.0kb downstream 5.0kb downstream 620 false Scaffold20971: 1-620 Capsella grandiflora
Cagra.20971s0001 10.0kb upstream 10.0kb upstream 1543 true Scaffold20971: 621-2163 Capsella grandiflora
Cagra.20971s0001 10.0kb upstream 10.0kb upstream 1021 false Scaffold20971: 1143-2163 Capsella grandiflora
Cagra.20971s0001 10.0kb downstream 10.0kb downstream 1142 true Scaffold20971: 1-1142 Capsella grandiflora
Cagra.20971s0001 10.0kb downstream 10.0kb downstream 620 false Scaffold20971: 1-620 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368696 5261 Brassicaceae View MSA
123841420 5264 Brassicales-Malvales View MSA
124336765 5266 SBM View MSA
124252779 5268 Malvidae View MSA
124074559 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain