Gene : Cagra.21079s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR19288:SF25 - PHOSPHATIDYLGLYCEROPHOSPHATASE GEP4, MITOCHONDRIAL Genomic Order:  5
Name:  ? Cagra.21079s0005 Secondary Identifier:  ? PAC:28908472
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY4FS-7 Capsella grandiflora pathologic  
Cgrandiflora PWY-5269 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.21079s0005 0.5kb upstream 0.5kb upstream 2099 true Scaffold21079: 18170-20268 Capsella grandiflora
Cagra.21079s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold21079: 19769-20268 Capsella grandiflora
Cagra.21079s0005 0.5kb downstream 0.5kb downstream 2099 true Scaffold21079: 17670-19768 Capsella grandiflora
Cagra.21079s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold21079: 17670-18169 Capsella grandiflora
Cagra.21079s0005 1.0kb upstream 1.0kb upstream 2599 true Scaffold21079: 18170-20768 Capsella grandiflora
Cagra.21079s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold21079: 19769-20768 Capsella grandiflora
Cagra.21079s0005 1.0kb downstream 1.0kb downstream 2599 true Scaffold21079: 17170-19768 Capsella grandiflora
Cagra.21079s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold21079: 17170-18169 Capsella grandiflora
Cagra.21079s0005 2.0kb upstream 2.0kb upstream 3599 true Scaffold21079: 18170-21768 Capsella grandiflora
Cagra.21079s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold21079: 19769-21768 Capsella grandiflora
Cagra.21079s0005 2.0kb downstream 2.0kb downstream 3599 true Scaffold21079: 16170-19768 Capsella grandiflora
Cagra.21079s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold21079: 16170-18169 Capsella grandiflora
Cagra.21079s0005 5.0kb upstream 5.0kb upstream 6599 true Scaffold21079: 18170-24768 Capsella grandiflora
Cagra.21079s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold21079: 19769-24768 Capsella grandiflora
Cagra.21079s0005 5.0kb downstream 5.0kb downstream 6599 true Scaffold21079: 13170-19768 Capsella grandiflora
Cagra.21079s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold21079: 13170-18169 Capsella grandiflora
Cagra.21079s0005 10.0kb upstream 10.0kb upstream 11599 true Scaffold21079: 18170-29768 Capsella grandiflora
Cagra.21079s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold21079: 19769-29768 Capsella grandiflora
Cagra.21079s0005 10.0kb downstream 10.0kb downstream 11599 true Scaffold21079: 8170-19768 Capsella grandiflora
Cagra.21079s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold21079: 8170-18169 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373083 5261 Brassicaceae View MSA
123834432 5264 Brassicales-Malvales View MSA
124340921 5266 SBM View MSA
124244311 5268 Malvidae View MSA
124061153 5270 Rosid View MSA
123744955 5271 Pentapetalae View MSA
122787883 5272 Eudicot View MSA
122047314 5273 Angiosperm View MSA
121345007 5274 Embryophyte View MSA
123425553 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain