Gene : Cagra.22847s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10896:SF20 - GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE I Genomic Order:  2
Name:  ? Cagra.22847s0002 Secondary Identifier:  ? PAC:28919893
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5800 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.22847s0002 0.5kb upstream 0.5kb upstream 3195 true Scaffold22847: 3086-6280 Capsella grandiflora
Cagra.22847s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold22847: 3086-3585 Capsella grandiflora
Cagra.22847s0002 0.5kb downstream 0.5kb downstream 3195 true Scaffold22847: 3586-6780 Capsella grandiflora
Cagra.22847s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold22847: 6281-6780 Capsella grandiflora
Cagra.22847s0002 1.0kb upstream 1.0kb upstream 3695 true Scaffold22847: 2586-6280 Capsella grandiflora
Cagra.22847s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold22847: 2586-3585 Capsella grandiflora
Cagra.22847s0002 1.0kb downstream 1.0kb downstream 3695 true Scaffold22847: 3586-7280 Capsella grandiflora
Cagra.22847s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold22847: 6281-7280 Capsella grandiflora
Cagra.22847s0002 2.0kb upstream 2.0kb upstream 4695 true Scaffold22847: 1586-6280 Capsella grandiflora
Cagra.22847s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold22847: 1586-3585 Capsella grandiflora
Cagra.22847s0002 2.0kb downstream 2.0kb downstream 4695 true Scaffold22847: 3586-8280 Capsella grandiflora
Cagra.22847s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold22847: 6281-8280 Capsella grandiflora
Cagra.22847s0002 5.0kb upstream 5.0kb upstream 6280 true Scaffold22847: 1-6280 Capsella grandiflora
Cagra.22847s0002 5.0kb upstream 5.0kb upstream 3585 false Scaffold22847: 1-3585 Capsella grandiflora
Cagra.22847s0002 5.0kb downstream 5.0kb downstream 7695 true Scaffold22847: 3586-11280 Capsella grandiflora
Cagra.22847s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold22847: 6281-11280 Capsella grandiflora
Cagra.22847s0002 10.0kb upstream 10.0kb upstream 6280 true Scaffold22847: 1-6280 Capsella grandiflora
Cagra.22847s0002 10.0kb upstream 10.0kb upstream 3585 false Scaffold22847: 1-3585 Capsella grandiflora
Cagra.22847s0002 10.0kb downstream 10.0kb downstream 12695 true Scaffold22847: 3586-16280 Capsella grandiflora
Cagra.22847s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold22847: 6281-16280 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372036 5261 Brassicaceae View MSA
123829851 5264 Brassicales-Malvales View MSA
124351012 5266 SBM View MSA
124252838 5268 Malvidae View MSA
124065627 5270 Rosid View MSA
123748669 5271 Pentapetalae View MSA
122794067 5272 Eudicot View MSA
122050395 5273 Angiosperm View MSA
121346281 5274 Embryophyte View MSA
123380360 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain