Gene : Cagra.19576s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12192:SF1 - CHAC-LIKE FAMILY PROTEIN Genomic Order:  2
Name:  ? Cagra.19576s0002 Secondary Identifier:  ? PAC:28910645
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.19576s0002 0.5kb upstream 0.5kb upstream 2083 true Scaffold19576: 4124-6206 Capsella grandiflora
Cagra.19576s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold19576: 5707-6206 Capsella grandiflora
Cagra.19576s0002 0.5kb downstream 0.5kb downstream 2083 true Scaffold19576: 3624-5706 Capsella grandiflora
Cagra.19576s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold19576: 3624-4123 Capsella grandiflora
Cagra.19576s0002 1.0kb upstream 1.0kb upstream 2583 true Scaffold19576: 4124-6706 Capsella grandiflora
Cagra.19576s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold19576: 5707-6706 Capsella grandiflora
Cagra.19576s0002 1.0kb downstream 1.0kb downstream 2583 true Scaffold19576: 3124-5706 Capsella grandiflora
Cagra.19576s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold19576: 3124-4123 Capsella grandiflora
Cagra.19576s0002 2.0kb upstream 2.0kb upstream 3583 true Scaffold19576: 4124-7706 Capsella grandiflora
Cagra.19576s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold19576: 5707-7706 Capsella grandiflora
Cagra.19576s0002 2.0kb downstream 2.0kb downstream 3583 true Scaffold19576: 2124-5706 Capsella grandiflora
Cagra.19576s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold19576: 2124-4123 Capsella grandiflora
Cagra.19576s0002 5.0kb upstream 5.0kb upstream 6583 true Scaffold19576: 4124-10706 Capsella grandiflora
Cagra.19576s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold19576: 5707-10706 Capsella grandiflora
Cagra.19576s0002 5.0kb downstream 5.0kb downstream 5706 true Scaffold19576: 1-5706 Capsella grandiflora
Cagra.19576s0002 5.0kb downstream 5.0kb downstream 4123 false Scaffold19576: 1-4123 Capsella grandiflora
Cagra.19576s0002 10.0kb upstream 10.0kb upstream 10718 true Scaffold19576: 4124-14841 Capsella grandiflora
Cagra.19576s0002 10.0kb upstream 10.0kb upstream 9135 false Scaffold19576: 5707-14841 Capsella grandiflora
Cagra.19576s0002 10.0kb downstream 10.0kb downstream 5706 true Scaffold19576: 1-5706 Capsella grandiflora
Cagra.19576s0002 10.0kb downstream 10.0kb downstream 4123 false Scaffold19576: 1-4123 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368260 5261 Brassicaceae View MSA
123830002 5264 Brassicales-Malvales View MSA
124340312 5266 SBM View MSA
124241642 5268 Malvidae View MSA
124060758 5270 Rosid View MSA
123751581 5271 Pentapetalae View MSA
122789241 5272 Eudicot View MSA
122047820 5273 Angiosperm View MSA
121346610 5274 Embryophyte View MSA
123426702 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain