Gene : Cagra.1085s0021 C. grandiflora v1.1
Defline:  (1 of 3) PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Genomic Order:  21
Name:  ? Cagra.1085s0021 Secondary Identifier:  ? PAC:28900616
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1085s0021 0.5kb upstream 0.5kb upstream 1418 true Scaffold1085: 86904-88321 Capsella grandiflora
Cagra.1085s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold1085: 87822-88321 Capsella grandiflora
Cagra.1085s0021 0.5kb downstream 0.5kb downstream 1418 true Scaffold1085: 86404-87821 Capsella grandiflora
Cagra.1085s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold1085: 86404-86903 Capsella grandiflora
Cagra.1085s0021 1.0kb upstream 1.0kb upstream 1918 true Scaffold1085: 86904-88821 Capsella grandiflora
Cagra.1085s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold1085: 87822-88821 Capsella grandiflora
Cagra.1085s0021 1.0kb downstream 1.0kb downstream 1918 true Scaffold1085: 85904-87821 Capsella grandiflora
Cagra.1085s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold1085: 85904-86903 Capsella grandiflora
Cagra.1085s0021 2.0kb upstream 2.0kb upstream 2918 true Scaffold1085: 86904-89821 Capsella grandiflora
Cagra.1085s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold1085: 87822-89821 Capsella grandiflora
Cagra.1085s0021 2.0kb downstream 2.0kb downstream 2918 true Scaffold1085: 84904-87821 Capsella grandiflora
Cagra.1085s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold1085: 84904-86903 Capsella grandiflora
Cagra.1085s0021 5.0kb upstream 5.0kb upstream 5918 true Scaffold1085: 86904-92821 Capsella grandiflora
Cagra.1085s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold1085: 87822-92821 Capsella grandiflora
Cagra.1085s0021 5.0kb downstream 5.0kb downstream 5918 true Scaffold1085: 81904-87821 Capsella grandiflora
Cagra.1085s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold1085: 81904-86903 Capsella grandiflora
Cagra.1085s0021 10.0kb upstream 10.0kb upstream 10918 true Scaffold1085: 86904-97821 Capsella grandiflora
Cagra.1085s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold1085: 87822-97821 Capsella grandiflora
Cagra.1085s0021 10.0kb downstream 10.0kb downstream 10918 true Scaffold1085: 76904-87821 Capsella grandiflora
Cagra.1085s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold1085: 76904-86903 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365468 5261 Brassicaceae View MSA
123798963 5264 Brassicales-Malvales View MSA
124296535 5266 SBM View MSA
124252904 5268 Malvidae View MSA
124071725 5270 Rosid View MSA
123745197 5271 Pentapetalae View MSA
122794608 5272 Eudicot View MSA
122048508 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain