Gene : Cagra.1157s0007 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31140:SF3 - AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR RAV2-RELATED Genomic Order:  7
Name:  ? Cagra.1157s0007 Secondary Identifier:  ? PAC:28919319
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1157s0007 0.5kb upstream 0.5kb upstream 1580 true Scaffold1157: 37865-39444 Capsella grandiflora
Cagra.1157s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1157: 37865-38364 Capsella grandiflora
Cagra.1157s0007 0.5kb downstream 0.5kb downstream 1580 true Scaffold1157: 38365-39944 Capsella grandiflora
Cagra.1157s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1157: 39445-39944 Capsella grandiflora
Cagra.1157s0007 1.0kb upstream 1.0kb upstream 2080 true Scaffold1157: 37365-39444 Capsella grandiflora
Cagra.1157s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1157: 37365-38364 Capsella grandiflora
Cagra.1157s0007 1.0kb downstream 1.0kb downstream 2080 true Scaffold1157: 38365-40444 Capsella grandiflora
Cagra.1157s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1157: 39445-40444 Capsella grandiflora
Cagra.1157s0007 2.0kb upstream 2.0kb upstream 3080 true Scaffold1157: 36365-39444 Capsella grandiflora
Cagra.1157s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1157: 36365-38364 Capsella grandiflora
Cagra.1157s0007 2.0kb downstream 2.0kb downstream 3080 true Scaffold1157: 38365-41444 Capsella grandiflora
Cagra.1157s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1157: 39445-41444 Capsella grandiflora
Cagra.1157s0007 5.0kb upstream 5.0kb upstream 6080 true Scaffold1157: 33365-39444 Capsella grandiflora
Cagra.1157s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1157: 33365-38364 Capsella grandiflora
Cagra.1157s0007 5.0kb downstream 5.0kb downstream 6080 true Scaffold1157: 38365-44444 Capsella grandiflora
Cagra.1157s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1157: 39445-44444 Capsella grandiflora
Cagra.1157s0007 10.0kb upstream 10.0kb upstream 11080 true Scaffold1157: 28365-39444 Capsella grandiflora
Cagra.1157s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1157: 28365-38364 Capsella grandiflora
Cagra.1157s0007 10.0kb downstream 10.0kb downstream 11080 true Scaffold1157: 38365-49444 Capsella grandiflora
Cagra.1157s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold1157: 39445-49444 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373165 5261 Brassicaceae View MSA
123837249 5264 Brassicales-Malvales View MSA
124346726 5266 SBM View MSA
124243477 5268 Malvidae View MSA
124062734 5270 Rosid View MSA
123743747 5271 Pentapetalae View MSA
122794960 5272 Eudicot View MSA
122047550 5273 Angiosperm View MSA
121310758 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain