Gene : Cagra.1148s0003 C. grandiflora v1.1
Defline:  (1 of 31) KOG1947 - Leucine rich repeat proteins, some proteins contain F-box Genomic Order:  3
Name:  ? Cagra.1148s0003 Secondary Identifier:  ? PAC:28913226
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1148s0003 0.5kb upstream 0.5kb upstream 1982 true Scaffold1148: 13022-15003 Capsella grandiflora
Cagra.1148s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1148: 14504-15003 Capsella grandiflora
Cagra.1148s0003 0.5kb downstream 0.5kb downstream 1982 true Scaffold1148: 12522-14503 Capsella grandiflora
Cagra.1148s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1148: 12522-13021 Capsella grandiflora
Cagra.1148s0003 1.0kb upstream 1.0kb upstream 2482 true Scaffold1148: 13022-15503 Capsella grandiflora
Cagra.1148s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1148: 14504-15503 Capsella grandiflora
Cagra.1148s0003 1.0kb downstream 1.0kb downstream 2482 true Scaffold1148: 12022-14503 Capsella grandiflora
Cagra.1148s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1148: 12022-13021 Capsella grandiflora
Cagra.1148s0003 2.0kb upstream 2.0kb upstream 3482 true Scaffold1148: 13022-16503 Capsella grandiflora
Cagra.1148s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1148: 14504-16503 Capsella grandiflora
Cagra.1148s0003 2.0kb downstream 2.0kb downstream 3482 true Scaffold1148: 11022-14503 Capsella grandiflora
Cagra.1148s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1148: 11022-13021 Capsella grandiflora
Cagra.1148s0003 5.0kb upstream 5.0kb upstream 6482 true Scaffold1148: 13022-19503 Capsella grandiflora
Cagra.1148s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1148: 14504-19503 Capsella grandiflora
Cagra.1148s0003 5.0kb downstream 5.0kb downstream 6482 true Scaffold1148: 8022-14503 Capsella grandiflora
Cagra.1148s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1148: 8022-13021 Capsella grandiflora
Cagra.1148s0003 10.0kb upstream 10.0kb upstream 11482 true Scaffold1148: 13022-24503 Capsella grandiflora
Cagra.1148s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold1148: 14504-24503 Capsella grandiflora
Cagra.1148s0003 10.0kb downstream 10.0kb downstream 11482 true Scaffold1148: 3022-14503 Capsella grandiflora
Cagra.1148s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold1148: 3022-13021 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364477 5261 Brassicaceae View MSA
123835222 5264 Brassicales-Malvales View MSA
124338964 5266 SBM View MSA
124242004 5268 Malvidae View MSA
124066290 5270 Rosid View MSA
123750705 5271 Pentapetalae View MSA
122788712 5272 Eudicot View MSA
122042802 5273 Angiosperm View MSA
121310027 5274 Embryophyte View MSA
123347630 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain