Gene : Cagra.11346s0001 C. grandiflora v1.1
Defline:  (1 of 13) PF13963 - Transposase-associated domain (Transpos_assoc) Genomic Order:  1
Name:  ? Cagra.11346s0001 Secondary Identifier:  ? PAC:28914777
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11346s0001 0.5kb upstream 0.5kb upstream 1184 true Scaffold11346: 8-1191 Capsella grandiflora
Cagra.11346s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold11346: 692-1191 Capsella grandiflora
Cagra.11346s0001 0.5kb downstream 0.5kb downstream 691 true Scaffold11346: 1-691 Capsella grandiflora
Cagra.11346s0001 0.5kb downstream 0.5kb downstream 7 false Scaffold11346: 1-7 Capsella grandiflora
Cagra.11346s0001 1.0kb upstream 1.0kb upstream 1591 true Scaffold11346: 8-1598 Capsella grandiflora
Cagra.11346s0001 1.0kb upstream 1.0kb upstream 907 false Scaffold11346: 692-1598 Capsella grandiflora
Cagra.11346s0001 1.0kb downstream 1.0kb downstream 691 true Scaffold11346: 1-691 Capsella grandiflora
Cagra.11346s0001 1.0kb downstream 1.0kb downstream 7 false Scaffold11346: 1-7 Capsella grandiflora
Cagra.11346s0001 2.0kb upstream 2.0kb upstream 1591 true Scaffold11346: 8-1598 Capsella grandiflora
Cagra.11346s0001 2.0kb upstream 2.0kb upstream 907 false Scaffold11346: 692-1598 Capsella grandiflora
Cagra.11346s0001 2.0kb downstream 2.0kb downstream 691 true Scaffold11346: 1-691 Capsella grandiflora
Cagra.11346s0001 2.0kb downstream 2.0kb downstream 7 false Scaffold11346: 1-7 Capsella grandiflora
Cagra.11346s0001 5.0kb upstream 5.0kb upstream 1591 true Scaffold11346: 8-1598 Capsella grandiflora
Cagra.11346s0001 5.0kb upstream 5.0kb upstream 907 false Scaffold11346: 692-1598 Capsella grandiflora
Cagra.11346s0001 5.0kb downstream 5.0kb downstream 691 true Scaffold11346: 1-691 Capsella grandiflora
Cagra.11346s0001 5.0kb downstream 5.0kb downstream 7 false Scaffold11346: 1-7 Capsella grandiflora
Cagra.11346s0001 10.0kb upstream 10.0kb upstream 1591 true Scaffold11346: 8-1598 Capsella grandiflora
Cagra.11346s0001 10.0kb upstream 10.0kb upstream 907 false Scaffold11346: 692-1598 Capsella grandiflora
Cagra.11346s0001 10.0kb downstream 10.0kb downstream 691 true Scaffold11346: 1-691 Capsella grandiflora
Cagra.11346s0001 10.0kb downstream 10.0kb downstream 7 false Scaffold11346: 1-7 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338255 5261 Brassicaceae View MSA
123841113 5264 Brassicales-Malvales View MSA
124322847 5266 SBM View MSA
124237670 5268 Malvidae View MSA
124039032 5270 Rosid View MSA
123752947 5271 Pentapetalae View MSA
122774877 5272 Eudicot View MSA
122050110 5273 Angiosperm View MSA
121351710 5274 Embryophyte View MSA
123427809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain