Gene : Cagra.1226s0039 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR Genomic Order:  39
Name:  ? Cagra.1226s0039 Secondary Identifier:  ? PAC:28916555
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1226s0039 0.5kb upstream 0.5kb upstream 2268 true Scaffold1226: 172743-175010 Capsella grandiflora
Cagra.1226s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold1226: 172743-173242 Capsella grandiflora
Cagra.1226s0039 0.5kb downstream 0.5kb downstream 2268 true Scaffold1226: 173243-175510 Capsella grandiflora
Cagra.1226s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold1226: 175011-175510 Capsella grandiflora
Cagra.1226s0039 1.0kb upstream 1.0kb upstream 2768 true Scaffold1226: 172243-175010 Capsella grandiflora
Cagra.1226s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold1226: 172243-173242 Capsella grandiflora
Cagra.1226s0039 1.0kb downstream 1.0kb downstream 2768 true Scaffold1226: 173243-176010 Capsella grandiflora
Cagra.1226s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold1226: 175011-176010 Capsella grandiflora
Cagra.1226s0039 2.0kb upstream 2.0kb upstream 3768 true Scaffold1226: 171243-175010 Capsella grandiflora
Cagra.1226s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold1226: 171243-173242 Capsella grandiflora
Cagra.1226s0039 2.0kb downstream 2.0kb downstream 3768 true Scaffold1226: 173243-177010 Capsella grandiflora
Cagra.1226s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold1226: 175011-177010 Capsella grandiflora
Cagra.1226s0039 5.0kb upstream 5.0kb upstream 6768 true Scaffold1226: 168243-175010 Capsella grandiflora
Cagra.1226s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold1226: 168243-173242 Capsella grandiflora
Cagra.1226s0039 5.0kb downstream 5.0kb downstream 6768 true Scaffold1226: 173243-180010 Capsella grandiflora
Cagra.1226s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold1226: 175011-180010 Capsella grandiflora
Cagra.1226s0039 10.0kb upstream 10.0kb upstream 11768 true Scaffold1226: 163243-175010 Capsella grandiflora
Cagra.1226s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold1226: 163243-173242 Capsella grandiflora
Cagra.1226s0039 10.0kb downstream 10.0kb downstream 11768 true Scaffold1226: 173243-185010 Capsella grandiflora
Cagra.1226s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold1226: 175011-185010 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372017 5261 Brassicaceae View MSA
123840121 5264 Brassicales-Malvales View MSA
124344965 5266 SBM View MSA
124250178 5268 Malvidae View MSA
124071112 5270 Rosid View MSA
123744943 5271 Pentapetalae View MSA
122797737 5272 Eudicot View MSA
122048577 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain