Gene : Cagra.1194s0038 C. grandiflora v1.1
Defline:  (1 of 19) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  38
Name:  ? Cagra.1194s0038 Secondary Identifier:  ? PAC:28912817
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1194s0038 0.5kb upstream 0.5kb upstream 2108 true Scaffold1194: 116369-118476 Capsella grandiflora
Cagra.1194s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold1194: 117977-118476 Capsella grandiflora
Cagra.1194s0038 0.5kb downstream 0.5kb downstream 2108 true Scaffold1194: 115869-117976 Capsella grandiflora
Cagra.1194s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold1194: 115869-116368 Capsella grandiflora
Cagra.1194s0038 1.0kb upstream 1.0kb upstream 2608 true Scaffold1194: 116369-118976 Capsella grandiflora
Cagra.1194s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold1194: 117977-118976 Capsella grandiflora
Cagra.1194s0038 1.0kb downstream 1.0kb downstream 2608 true Scaffold1194: 115369-117976 Capsella grandiflora
Cagra.1194s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold1194: 115369-116368 Capsella grandiflora
Cagra.1194s0038 2.0kb upstream 2.0kb upstream 3608 true Scaffold1194: 116369-119976 Capsella grandiflora
Cagra.1194s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold1194: 117977-119976 Capsella grandiflora
Cagra.1194s0038 2.0kb downstream 2.0kb downstream 3608 true Scaffold1194: 114369-117976 Capsella grandiflora
Cagra.1194s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold1194: 114369-116368 Capsella grandiflora
Cagra.1194s0038 5.0kb upstream 5.0kb upstream 6608 true Scaffold1194: 116369-122976 Capsella grandiflora
Cagra.1194s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold1194: 117977-122976 Capsella grandiflora
Cagra.1194s0038 5.0kb downstream 5.0kb downstream 6608 true Scaffold1194: 111369-117976 Capsella grandiflora
Cagra.1194s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold1194: 111369-116368 Capsella grandiflora
Cagra.1194s0038 10.0kb upstream 10.0kb upstream 11608 true Scaffold1194: 116369-127976 Capsella grandiflora
Cagra.1194s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold1194: 117977-127976 Capsella grandiflora
Cagra.1194s0038 10.0kb downstream 10.0kb downstream 11608 true Scaffold1194: 106369-117976 Capsella grandiflora
Cagra.1194s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold1194: 106369-116368 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371222 5261 Brassicaceae View MSA
123837227 5264 Brassicales-Malvales View MSA
124348535 5266 SBM View MSA
124237197 5268 Malvidae View MSA
124063690 5270 Rosid View MSA
123747336 5271 Pentapetalae View MSA
122785819 5272 Eudicot View MSA
122047273 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain