Gene : Cagra.1194s0066 C. grandiflora v1.1
Defline:  (1 of 3) 1.1.1.44 - Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) / Phosphogluconic acid dehydrogenase Genomic Order:  66
Name:  ? Cagra.1194s0066 Secondary Identifier:  ? PAC:28912829
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora OXIDATIVEPENT-PWY Capsella grandiflora pathologic  
Cgrandiflora PENTOSE-P-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1194s0066 0.5kb upstream 0.5kb upstream 2133 true Scaffold1194: 194539-196671 Capsella grandiflora
Cagra.1194s0066 0.5kb upstream 0.5kb upstream 500 false Scaffold1194: 196172-196671 Capsella grandiflora
Cagra.1194s0066 0.5kb downstream 0.5kb downstream 2133 true Scaffold1194: 194039-196171 Capsella grandiflora
Cagra.1194s0066 0.5kb downstream 0.5kb downstream 500 false Scaffold1194: 194039-194538 Capsella grandiflora
Cagra.1194s0066 1.0kb upstream 1.0kb upstream 2633 true Scaffold1194: 194539-197171 Capsella grandiflora
Cagra.1194s0066 1.0kb upstream 1.0kb upstream 1000 false Scaffold1194: 196172-197171 Capsella grandiflora
Cagra.1194s0066 1.0kb downstream 1.0kb downstream 2633 true Scaffold1194: 193539-196171 Capsella grandiflora
Cagra.1194s0066 1.0kb downstream 1.0kb downstream 1000 false Scaffold1194: 193539-194538 Capsella grandiflora
Cagra.1194s0066 2.0kb upstream 2.0kb upstream 3633 true Scaffold1194: 194539-198171 Capsella grandiflora
Cagra.1194s0066 2.0kb upstream 2.0kb upstream 2000 false Scaffold1194: 196172-198171 Capsella grandiflora
Cagra.1194s0066 2.0kb downstream 2.0kb downstream 3633 true Scaffold1194: 192539-196171 Capsella grandiflora
Cagra.1194s0066 2.0kb downstream 2.0kb downstream 2000 false Scaffold1194: 192539-194538 Capsella grandiflora
Cagra.1194s0066 5.0kb upstream 5.0kb upstream 6633 true Scaffold1194: 194539-201171 Capsella grandiflora
Cagra.1194s0066 5.0kb upstream 5.0kb upstream 5000 false Scaffold1194: 196172-201171 Capsella grandiflora
Cagra.1194s0066 5.0kb downstream 5.0kb downstream 6633 true Scaffold1194: 189539-196171 Capsella grandiflora
Cagra.1194s0066 5.0kb downstream 5.0kb downstream 5000 false Scaffold1194: 189539-194538 Capsella grandiflora
Cagra.1194s0066 10.0kb upstream 10.0kb upstream 11633 true Scaffold1194: 194539-206171 Capsella grandiflora
Cagra.1194s0066 10.0kb upstream 10.0kb upstream 10000 false Scaffold1194: 196172-206171 Capsella grandiflora
Cagra.1194s0066 10.0kb downstream 10.0kb downstream 11633 true Scaffold1194: 184539-196171 Capsella grandiflora
Cagra.1194s0066 10.0kb downstream 10.0kb downstream 10000 false Scaffold1194: 184539-194538 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367154 5261 Brassicaceae View MSA
123835743 5264 Brassicales-Malvales View MSA
124350427 5266 SBM View MSA
124251436 5268 Malvidae View MSA
124067916 5270 Rosid View MSA
123746005 5271 Pentapetalae View MSA
122793535 5272 Eudicot View MSA
122047871 5273 Angiosperm View MSA
121351017 5274 Embryophyte View MSA
123424238 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain