Gene : Cagra.12068s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11945:SF174 - PROTEIN AGAMOUS-LIKE 48-RELATED Genomic Order:  1
Name:  ? Cagra.12068s0001 Secondary Identifier:  ? PAC:28917624
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12068s0001 0.5kb upstream 0.5kb upstream 1049 true Scaffold12068: 1082-2130 Capsella grandiflora
Cagra.12068s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold12068: 1631-2130 Capsella grandiflora
Cagra.12068s0001 0.5kb downstream 0.5kb downstream 1049 true Scaffold12068: 582-1630 Capsella grandiflora
Cagra.12068s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold12068: 582-1081 Capsella grandiflora
Cagra.12068s0001 1.0kb upstream 1.0kb upstream 1549 true Scaffold12068: 1082-2630 Capsella grandiflora
Cagra.12068s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold12068: 1631-2630 Capsella grandiflora
Cagra.12068s0001 1.0kb downstream 1.0kb downstream 1549 true Scaffold12068: 82-1630 Capsella grandiflora
Cagra.12068s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold12068: 82-1081 Capsella grandiflora
Cagra.12068s0001 2.0kb upstream 2.0kb upstream 2549 true Scaffold12068: 1082-3630 Capsella grandiflora
Cagra.12068s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold12068: 1631-3630 Capsella grandiflora
Cagra.12068s0001 2.0kb downstream 2.0kb downstream 1630 true Scaffold12068: 1-1630 Capsella grandiflora
Cagra.12068s0001 2.0kb downstream 2.0kb downstream 1081 false Scaffold12068: 1-1081 Capsella grandiflora
Cagra.12068s0001 5.0kb upstream 5.0kb upstream 5549 true Scaffold12068: 1082-6630 Capsella grandiflora
Cagra.12068s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold12068: 1631-6630 Capsella grandiflora
Cagra.12068s0001 5.0kb downstream 5.0kb downstream 1630 true Scaffold12068: 1-1630 Capsella grandiflora
Cagra.12068s0001 5.0kb downstream 5.0kb downstream 1081 false Scaffold12068: 1-1081 Capsella grandiflora
Cagra.12068s0001 10.0kb upstream 10.0kb upstream 10093 true Scaffold12068: 1082-11174 Capsella grandiflora
Cagra.12068s0001 10.0kb upstream 10.0kb upstream 9544 false Scaffold12068: 1631-11174 Capsella grandiflora
Cagra.12068s0001 10.0kb downstream 10.0kb downstream 1630 true Scaffold12068: 1-1630 Capsella grandiflora
Cagra.12068s0001 10.0kb downstream 10.0kb downstream 1081 false Scaffold12068: 1-1081 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380218 5261 Brassicaceae View MSA
123802605 5264 Brassicales-Malvales View MSA
124299787 5266 SBM View MSA
124151111 5268 Malvidae View MSA
124038400 5270 Rosid View MSA
123610787 5271 Pentapetalae View MSA
122645379 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain