Gene : Cagra.0133s0081 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23130:SF80 - AUXIN-INDUCED IN ROOT CULTURES PROTEIN 12 Genomic Order:  81
Name:  ? Cagra.0133s0081 Secondary Identifier:  ? PAC:28899405
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0081 0.5kb upstream 0.5kb upstream 1535 true Scaffold133: 326054-327588 Capsella grandiflora
Cagra.0133s0081 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 326054-326553 Capsella grandiflora
Cagra.0133s0081 0.5kb downstream 0.5kb downstream 1535 true Scaffold133: 326554-328088 Capsella grandiflora
Cagra.0133s0081 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 327589-328088 Capsella grandiflora
Cagra.0133s0081 1.0kb upstream 1.0kb upstream 2035 true Scaffold133: 325554-327588 Capsella grandiflora
Cagra.0133s0081 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 325554-326553 Capsella grandiflora
Cagra.0133s0081 1.0kb downstream 1.0kb downstream 2035 true Scaffold133: 326554-328588 Capsella grandiflora
Cagra.0133s0081 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 327589-328588 Capsella grandiflora
Cagra.0133s0081 2.0kb upstream 2.0kb upstream 3035 true Scaffold133: 324554-327588 Capsella grandiflora
Cagra.0133s0081 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 324554-326553 Capsella grandiflora
Cagra.0133s0081 2.0kb downstream 2.0kb downstream 3035 true Scaffold133: 326554-329588 Capsella grandiflora
Cagra.0133s0081 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 327589-329588 Capsella grandiflora
Cagra.0133s0081 5.0kb upstream 5.0kb upstream 6035 true Scaffold133: 321554-327588 Capsella grandiflora
Cagra.0133s0081 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 321554-326553 Capsella grandiflora
Cagra.0133s0081 5.0kb downstream 5.0kb downstream 6035 true Scaffold133: 326554-332588 Capsella grandiflora
Cagra.0133s0081 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 327589-332588 Capsella grandiflora
Cagra.0133s0081 10.0kb upstream 10.0kb upstream 11035 true Scaffold133: 316554-327588 Capsella grandiflora
Cagra.0133s0081 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 316554-326553 Capsella grandiflora
Cagra.0133s0081 10.0kb downstream 10.0kb downstream 11035 true Scaffold133: 326554-337588 Capsella grandiflora
Cagra.0133s0081 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 327589-337588 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367494 5261 Brassicaceae View MSA
123838996 5264 Brassicales-Malvales View MSA
124346154 5266 SBM View MSA
124247391 5268 Malvidae View MSA
124071203 5270 Rosid View MSA
123745343 5271 Pentapetalae View MSA
122771463 5272 Eudicot View MSA
122050143 5273 Angiosperm View MSA
121311761 5274 Embryophyte View MSA
123349016 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain