Gene : Cagra.1317s0034 C. grandiflora v1.1
Defline:  (1 of 3) PTHR26374:SF162 - C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED Genomic Order:  34
Name:  ? Cagra.1317s0034 Secondary Identifier:  ? PAC:28910500
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1317s0034 0.5kb upstream 0.5kb upstream 1272 true Scaffold1317: 118884-120155 Capsella grandiflora
Cagra.1317s0034 0.5kb upstream 0.5kb upstream 500 false Scaffold1317: 119656-120155 Capsella grandiflora
Cagra.1317s0034 0.5kb downstream 0.5kb downstream 1272 true Scaffold1317: 118384-119655 Capsella grandiflora
Cagra.1317s0034 0.5kb downstream 0.5kb downstream 500 false Scaffold1317: 118384-118883 Capsella grandiflora
Cagra.1317s0034 1.0kb upstream 1.0kb upstream 1772 true Scaffold1317: 118884-120655 Capsella grandiflora
Cagra.1317s0034 1.0kb upstream 1.0kb upstream 1000 false Scaffold1317: 119656-120655 Capsella grandiflora
Cagra.1317s0034 1.0kb downstream 1.0kb downstream 1772 true Scaffold1317: 117884-119655 Capsella grandiflora
Cagra.1317s0034 1.0kb downstream 1.0kb downstream 1000 false Scaffold1317: 117884-118883 Capsella grandiflora
Cagra.1317s0034 2.0kb upstream 2.0kb upstream 2772 true Scaffold1317: 118884-121655 Capsella grandiflora
Cagra.1317s0034 2.0kb upstream 2.0kb upstream 2000 false Scaffold1317: 119656-121655 Capsella grandiflora
Cagra.1317s0034 2.0kb downstream 2.0kb downstream 2772 true Scaffold1317: 116884-119655 Capsella grandiflora
Cagra.1317s0034 2.0kb downstream 2.0kb downstream 2000 false Scaffold1317: 116884-118883 Capsella grandiflora
Cagra.1317s0034 5.0kb upstream 5.0kb upstream 5772 true Scaffold1317: 118884-124655 Capsella grandiflora
Cagra.1317s0034 5.0kb upstream 5.0kb upstream 5000 false Scaffold1317: 119656-124655 Capsella grandiflora
Cagra.1317s0034 5.0kb downstream 5.0kb downstream 5772 true Scaffold1317: 113884-119655 Capsella grandiflora
Cagra.1317s0034 5.0kb downstream 5.0kb downstream 5000 false Scaffold1317: 113884-118883 Capsella grandiflora
Cagra.1317s0034 10.0kb upstream 10.0kb upstream 10772 true Scaffold1317: 118884-129655 Capsella grandiflora
Cagra.1317s0034 10.0kb upstream 10.0kb upstream 10000 false Scaffold1317: 119656-129655 Capsella grandiflora
Cagra.1317s0034 10.0kb downstream 10.0kb downstream 10772 true Scaffold1317: 108884-119655 Capsella grandiflora
Cagra.1317s0034 10.0kb downstream 10.0kb downstream 10000 false Scaffold1317: 108884-118883 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372714 5261 Brassicaceae View MSA
123838776 5264 Brassicales-Malvales View MSA
124351487 5266 SBM View MSA
124250734 5268 Malvidae View MSA
124071249 5270 Rosid View MSA
123747694 5271 Pentapetalae View MSA
122796352 5272 Eudicot View MSA
122051585 5273 Angiosperm View MSA
121348252 5274 Embryophyte View MSA
123380791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain