Gene : Cagra.13209s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11413:SF26 - CYSTATIN C Genomic Order:  1
Name:  ? Cagra.13209s0001 Secondary Identifier:  ? PAC:28907763
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13209s0001 0.5kb upstream 0.5kb upstream 534 true Scaffold13209: 1-534 Capsella grandiflora
Cagra.13209s0001 0.5kb upstream 0.5kb upstream 168 false Scaffold13209: 1-168 Capsella grandiflora
Cagra.13209s0001 0.5kb downstream 0.5kb downstream 866 true Scaffold13209: 169-1034 Capsella grandiflora
Cagra.13209s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold13209: 535-1034 Capsella grandiflora
Cagra.13209s0001 1.0kb upstream 1.0kb upstream 534 true Scaffold13209: 1-534 Capsella grandiflora
Cagra.13209s0001 1.0kb upstream 1.0kb upstream 168 false Scaffold13209: 1-168 Capsella grandiflora
Cagra.13209s0001 1.0kb downstream 1.0kb downstream 1268 true Scaffold13209: 169-1436 Capsella grandiflora
Cagra.13209s0001 1.0kb downstream 1.0kb downstream 902 false Scaffold13209: 535-1436 Capsella grandiflora
Cagra.13209s0001 2.0kb upstream 2.0kb upstream 534 true Scaffold13209: 1-534 Capsella grandiflora
Cagra.13209s0001 2.0kb upstream 2.0kb upstream 168 false Scaffold13209: 1-168 Capsella grandiflora
Cagra.13209s0001 2.0kb downstream 2.0kb downstream 1268 true Scaffold13209: 169-1436 Capsella grandiflora
Cagra.13209s0001 2.0kb downstream 2.0kb downstream 902 false Scaffold13209: 535-1436 Capsella grandiflora
Cagra.13209s0001 5.0kb upstream 5.0kb upstream 534 true Scaffold13209: 1-534 Capsella grandiflora
Cagra.13209s0001 5.0kb upstream 5.0kb upstream 168 false Scaffold13209: 1-168 Capsella grandiflora
Cagra.13209s0001 5.0kb downstream 5.0kb downstream 1268 true Scaffold13209: 169-1436 Capsella grandiflora
Cagra.13209s0001 5.0kb downstream 5.0kb downstream 902 false Scaffold13209: 535-1436 Capsella grandiflora
Cagra.13209s0001 10.0kb upstream 10.0kb upstream 534 true Scaffold13209: 1-534 Capsella grandiflora
Cagra.13209s0001 10.0kb upstream 10.0kb upstream 168 false Scaffold13209: 1-168 Capsella grandiflora
Cagra.13209s0001 10.0kb downstream 10.0kb downstream 1268 true Scaffold13209: 169-1436 Capsella grandiflora
Cagra.13209s0001 10.0kb downstream 10.0kb downstream 902 false Scaffold13209: 535-1436 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378748 5261 Brassicaceae View MSA
123833578 5264 Brassicales-Malvales View MSA
124341533 5266 SBM View MSA
124239558 5268 Malvidae View MSA
124072970 5270 Rosid View MSA
123747344 5271 Pentapetalae View MSA
122796590 5272 Eudicot View MSA
122051666 5273 Angiosperm View MSA
121351690 5274 Embryophyte View MSA
123426487 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain