Gene : Cagra.14461s0001 C. grandiflora v1.1
Defline:  (1 of 43) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1
Name:  ? Cagra.14461s0001 Secondary Identifier:  ? PAC:28894698
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.14461s0001 0.5kb upstream 0.5kb upstream 2025 true Scaffold14461: 1-2025 Capsella grandiflora
Cagra.14461s0001 0.5kb upstream 0.5kb upstream 20 false Scaffold14461: 1-20 Capsella grandiflora
Cagra.14461s0001 0.5kb downstream 0.5kb downstream 2505 true Scaffold14461: 21-2525 Capsella grandiflora
Cagra.14461s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold14461: 2026-2525 Capsella grandiflora
Cagra.14461s0001 1.0kb upstream 1.0kb upstream 2025 true Scaffold14461: 1-2025 Capsella grandiflora
Cagra.14461s0001 1.0kb upstream 1.0kb upstream 20 false Scaffold14461: 1-20 Capsella grandiflora
Cagra.14461s0001 1.0kb downstream 1.0kb downstream 3005 true Scaffold14461: 21-3025 Capsella grandiflora
Cagra.14461s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold14461: 2026-3025 Capsella grandiflora
Cagra.14461s0001 2.0kb upstream 2.0kb upstream 2025 true Scaffold14461: 1-2025 Capsella grandiflora
Cagra.14461s0001 2.0kb upstream 2.0kb upstream 20 false Scaffold14461: 1-20 Capsella grandiflora
Cagra.14461s0001 2.0kb downstream 2.0kb downstream 3996 true Scaffold14461: 21-4016 Capsella grandiflora
Cagra.14461s0001 2.0kb downstream 2.0kb downstream 1991 false Scaffold14461: 2026-4016 Capsella grandiflora
Cagra.14461s0001 5.0kb upstream 5.0kb upstream 2025 true Scaffold14461: 1-2025 Capsella grandiflora
Cagra.14461s0001 5.0kb upstream 5.0kb upstream 20 false Scaffold14461: 1-20 Capsella grandiflora
Cagra.14461s0001 5.0kb downstream 5.0kb downstream 3996 true Scaffold14461: 21-4016 Capsella grandiflora
Cagra.14461s0001 5.0kb downstream 5.0kb downstream 1991 false Scaffold14461: 2026-4016 Capsella grandiflora
Cagra.14461s0001 10.0kb upstream 10.0kb upstream 2025 true Scaffold14461: 1-2025 Capsella grandiflora
Cagra.14461s0001 10.0kb upstream 10.0kb upstream 20 false Scaffold14461: 1-20 Capsella grandiflora
Cagra.14461s0001 10.0kb downstream 10.0kb downstream 3996 true Scaffold14461: 21-4016 Capsella grandiflora
Cagra.14461s0001 10.0kb downstream 10.0kb downstream 1991 false Scaffold14461: 2026-4016 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372981 5261 Brassicaceae View MSA
123831030 5264 Brassicales-Malvales View MSA
124336473 5266 SBM View MSA
124242018 5268 Malvidae View MSA
124070457 5270 Rosid View MSA
123736471 5271 Pentapetalae View MSA
122786011 5272 Eudicot View MSA
122048876 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain