Protein Family : pentatricopeptide, putative, expressed 122048876

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  166

166 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30138.t000056 (1 of 249) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) R. communis v0.1 2368   30138: 435326-437693
29648.t000021 (1 of 249) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) R. communis v0.1 1575   29648: 146885-148459
29676.t000033 (1 of 451) PF13041 - PPR repeat family (PPR_2) R. communis v0.1 2550   29676: 237910-240459
Cucsa.077210 (1 of 185) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) C. sativus v1.0 2958   scaffold00791: 349882-352839
Cucsa.095330 (1 of 74) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) C. sativus v1.0 1908   scaffold00919: 1235447-1237354
Cucsa.284280 (1 of 74) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) C. sativus v1.0 2509   scaffold02653: 1121563-1124071
orange1.1g006388m.g (1 of 63) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) C. sinensis v1.1 1954   scaffold00019: 1200977-1202930
orange1.1g006580m.g (1 of 187) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) C. sinensis v1.1 1923   scaffold00002: 104723-106645
AT4G37170 (1 of 10) PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) A. thaliana TAIR10 2076   Chr4: 17498580-17500655
AT1G68930 (1 of 61) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A. thaliana TAIR10 2232   Chr1: 25918314-25920545
AT1G43980 (1 of 185) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A. thaliana TAIR10 1866   Chr1: 16687637-16689502
Thhalv10026762m.g (1 of 59) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) E. salsugineum v1.0 2085   scaffold_1: 1299283-1301367
Thhalv10011320m.g (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) E. salsugineum v1.0 1875   scaffold_7: 13515429-13517303
Thhalv10019713m.g (1 of 59) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) E. salsugineum v1.0 2232   scaffold_9: 5427986-5430217
Ciclev10000854m.g (1 of 186) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) C. clementina v1.0 2247   scaffold_5: 38085442-38087688
Ciclev10024955m.g (1 of 2) PF01535//PF12854//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) C. clementina v1.0 2280   scaffold_7: 2852147-2854426
Ciclev10033304m.g (1 of 66) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) C. clementina v1.0 2232   scaffold_4: 20274609-20276840
Lus10036921.g (1 of 21) PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) L. usitatissimum v1.0 2079   scaffold31: 1235740-1237818
Lus10028647.g (1 of 308) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) L. usitatissimum v1.0 1593   scaffold346: 574722-576314
Gorai.005G085100 (1 of 50) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) G. raimondii v2.1 2524   Chr05: 10525425-10527948
Gorai.013G098500 (1 of 70) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) G. raimondii v2.1 2598   Chr13: 17503091-17505688
Gorai.008G073100 (1 of 14) PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) G. raimondii v2.1 4036   Chr08: 12749866-12753901
Thecc1EG000554 (1 of 11) PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) T. cacao v1.1 3107   scaffold_1: 2295567-2298673
Thecc1EG011415 (1 of 82) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) T. cacao v1.1 4596   scaffold_2: 40011512-40016107
Thecc1EG035296 (1 of 45) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) T. cacao v1.1 3438   scaffold_8: 7914526-7917963
Migut.K00830 (1 of 2) PF01535//PF12854//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) M. guttatus v2.0 2550   scaffold_11: 10187297-10189846
Migut.L01150 (1 of 66) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) M. guttatus v2.0 3014   scaffold_12: 21942154-21945167
Migut.N03252 (1 of 234) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) M. guttatus v2.0 1887   scaffold_14: 25608562-25610448
Araha.10191s0007 (1 of 160) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A. halleri v1.1 2056   Scaffold10191: 36676-38731
Araha.22315s0002 (1 of 50) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A. halleri v1.1 4334   Scaffold22315: 7187-11520

166 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29648.m001934 R. communis v0.1 122048876 pentatricopeptide, putative, expressed 3 5273 Angiosperm
Cucsa.077210.1 C. sativus v1.0 122048876 pentatricopeptide, putative, expressed 3 5273 Angiosperm
AT1G43980.1 A. thaliana TAIR10 122048876 pentatricopeptide, putative, expressed 3 5273 Angiosperm
Thhalv10026762m E. salsugineum v1.0 122048876 pentatricopeptide, putative, expressed 3 5273 Angiosperm
Ciclev10024955m C. clementina v1.0 122048876 pentatricopeptide, putative, expressed 3 5273 Angiosperm
Lus10036921 L. usitatissimum v1.0 122048876 pentatricopeptide, putative, expressed 2 5273 Angiosperm
Gorai.008G073100.1 G. raimondii v2.1 122048876 pentatricopeptide, putative, expressed 3 5273 Angiosperm
Thecc1EG035296t1 T. cacao v1.1 122048876 pentatricopeptide, putative, expressed 3 5273 Angiosperm
Araha.10191s0007.1.p A. halleri v1.1 122048876 pentatricopeptide, putative, expressed 2 5273 Angiosperm
Cagra.14461s0001.1.p C. grandiflora v1.1 122048876 pentatricopeptide, putative, expressed 3 5273 Angiosperm
Glyma.13G332400.1.p G. max Wm82.a2.v1 122048876 pentatricopeptide, putative, expressed 4 5273 Angiosperm
Glyma.06G120100.1.p G. max Wm82.a2.v1 122048876 pentatricopeptide, putative, expressed 4 5273 Angiosperm
Medtr8g065730.1 M. truncatula Mt4.0v1 122048876 pentatricopeptide, putative, expressed 4 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00006.196 A. trichopoda v1.0 122048876 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Traes_6AS_97F4D73A5.2 T. aestivum v2.2 122048876 pentatricopeptide, putative, expressed 4 5273 Angiosperm
Traes_1AL_F90143782.1 T. aestivum v2.2 122048876 pentatricopeptide, putative, expressed 4 5273 Angiosperm
Traes_1DL_390B46FD0.1 T. aestivum v2.2 122048876 pentatricopeptide, putative, expressed 4 5273 Angiosperm
Traes_4BL_D17F6E2C5.1 T. aestivum v2.2 122048876 pentatricopeptide, putative, expressed 4 5273 Angiosperm
Eucgr.C02122.1.p E. grandis v2.0 122048876 pentatricopeptide, putative, expressed 2 5273 Angiosperm
Eucgr.H01992.1.p E. grandis v2.0 122048876 pentatricopeptide, putative, expressed 2 5273 Angiosperm
Prupe.8G012400.1.p P. persica v2.1 122048876 pentatricopeptide, putative, expressed 3 5273 Angiosperm
Prupe.1G297100.1.p P. persica v2.1 122048876 pentatricopeptide, putative, expressed 3 5273 Angiosperm
GSMUA_Achr1P22050_001 M. acuminata v1 122048876 pentatricopeptide, putative, expressed 1 5273 Angiosperm
Manes.13G128700.1.p M. esculenta v6.1 122048876 pentatricopeptide, putative, expressed 2 5273 Angiosperm
Kalax.0039s0162.1.p K. laxiflora v1.1 122048876 pentatricopeptide, putative, expressed 3 5273 Angiosperm
Kalax.0340s0025.1.p K. laxiflora v1.1 122048876 pentatricopeptide, putative, expressed 3 5273 Angiosperm
Seita.9G413600.1.p S. italica v2.2 122048876 pentatricopeptide, putative, expressed 3 5273 Angiosperm
Seita.4G122400.1.p S. italica v2.2 122048876 pentatricopeptide, putative, expressed 3 5273 Angiosperm
Bradi1g68870.1.p B. distachyon v3.1 122048876 pentatricopeptide, putative, expressed 3 5273 Angiosperm
Bradi5g01406.1.p B. distachyon v3.1 122048876 pentatricopeptide, putative, expressed 3 5273 Angiosperm