Gene : orange1.1g006388m.g C. sinensis v1.1
Defline:  (1 of 63) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  139
Name:  ? orange1.1g006388m.g Secondary Identifier:  ? PAC:18121712
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g006388m.g 0.5kb upstream 0.5kb upstream 2454 true scaffold00019: 1200477-1202930 Citrus sinensis
orange1.1g006388m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00019: 1200477-1200976 Citrus sinensis
orange1.1g006388m.g 0.5kb downstream 0.5kb downstream 2454 true scaffold00019: 1200977-1203430 Citrus sinensis
orange1.1g006388m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00019: 1202931-1203430 Citrus sinensis
orange1.1g006388m.g 1.0kb upstream 1.0kb upstream 2954 true scaffold00019: 1199977-1202930 Citrus sinensis
orange1.1g006388m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00019: 1199977-1200976 Citrus sinensis
orange1.1g006388m.g 1.0kb downstream 1.0kb downstream 2954 true scaffold00019: 1200977-1203930 Citrus sinensis
orange1.1g006388m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00019: 1202931-1203930 Citrus sinensis
orange1.1g006388m.g 2.0kb upstream 2.0kb upstream 3954 true scaffold00019: 1198977-1202930 Citrus sinensis
orange1.1g006388m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00019: 1198977-1200976 Citrus sinensis
orange1.1g006388m.g 2.0kb downstream 2.0kb downstream 3954 true scaffold00019: 1200977-1204930 Citrus sinensis
orange1.1g006388m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00019: 1202931-1204930 Citrus sinensis
orange1.1g006388m.g 5.0kb upstream 5.0kb upstream 6954 true scaffold00019: 1195977-1202930 Citrus sinensis
orange1.1g006388m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00019: 1195977-1200976 Citrus sinensis
orange1.1g006388m.g 5.0kb downstream 5.0kb downstream 6954 true scaffold00019: 1200977-1207930 Citrus sinensis
orange1.1g006388m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00019: 1202931-1207930 Citrus sinensis
orange1.1g006388m.g 10.0kb upstream 10.0kb upstream 11954 true scaffold00019: 1190977-1202930 Citrus sinensis
orange1.1g006388m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00019: 1190977-1200976 Citrus sinensis
orange1.1g006388m.g 10.0kb downstream 10.0kb downstream 11954 true scaffold00019: 1200977-1212930 Citrus sinensis
orange1.1g006388m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00019: 1202931-1212930 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124340552 5266 SBM View MSA
124252704 5268 Malvidae View MSA
124072363 5270 Rosid View MSA
123740411 5271 Pentapetalae View MSA
122793387 5272 Eudicot View MSA
122048876 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain