Gene : Thecc1EG035296 T. cacao v1.1
Defline:  (1 of 45) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1340
Name:  ? Thecc1EG035296 Secondary Identifier:  ? PAC:27458768
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG035296 0.5kb upstream 0.5kb upstream 3938 true scaffold_8: 7914026-7917963 Theobroma cacao
Thecc1EG035296 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 7914026-7914525 Theobroma cacao
Thecc1EG035296 0.5kb downstream 0.5kb downstream 3938 true scaffold_8: 7914526-7918463 Theobroma cacao
Thecc1EG035296 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 7917964-7918463 Theobroma cacao
Thecc1EG035296 1.0kb upstream 1.0kb upstream 4438 true scaffold_8: 7913526-7917963 Theobroma cacao
Thecc1EG035296 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 7913526-7914525 Theobroma cacao
Thecc1EG035296 1.0kb downstream 1.0kb downstream 4438 true scaffold_8: 7914526-7918963 Theobroma cacao
Thecc1EG035296 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 7917964-7918963 Theobroma cacao
Thecc1EG035296 2.0kb upstream 2.0kb upstream 5438 true scaffold_8: 7912526-7917963 Theobroma cacao
Thecc1EG035296 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 7912526-7914525 Theobroma cacao
Thecc1EG035296 2.0kb downstream 2.0kb downstream 5438 true scaffold_8: 7914526-7919963 Theobroma cacao
Thecc1EG035296 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 7917964-7919963 Theobroma cacao
Thecc1EG035296 5.0kb upstream 5.0kb upstream 8438 true scaffold_8: 7909526-7917963 Theobroma cacao
Thecc1EG035296 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 7909526-7914525 Theobroma cacao
Thecc1EG035296 5.0kb downstream 5.0kb downstream 8438 true scaffold_8: 7914526-7922963 Theobroma cacao
Thecc1EG035296 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 7917964-7922963 Theobroma cacao
Thecc1EG035296 10.0kb upstream 10.0kb upstream 13438 true scaffold_8: 7904526-7917963 Theobroma cacao
Thecc1EG035296 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 7904526-7914525 Theobroma cacao
Thecc1EG035296 10.0kb downstream 10.0kb downstream 13438 true scaffold_8: 7914526-7927963 Theobroma cacao
Thecc1EG035296 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 7917964-7927963 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831030 5264 Brassicales-Malvales View MSA
124336473 5266 SBM View MSA
124242018 5268 Malvidae View MSA
124070457 5270 Rosid View MSA
123736471 5271 Pentapetalae View MSA
122786011 5272 Eudicot View MSA
122048876 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain