Gene : Cucsa.095330 C. sativus v1.0
Defline:  (1 of 74) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  168
Name:  ? Cucsa.095330 Secondary Identifier:  ? PAC:16957863
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.095330 0.5kb upstream 0.5kb upstream 2408 true scaffold00919: 1235447-1237854 Cucumis sativus
Cucsa.095330 0.5kb upstream 0.5kb upstream 500 false scaffold00919: 1237355-1237854 Cucumis sativus
Cucsa.095330 0.5kb downstream 0.5kb downstream 2408 true scaffold00919: 1234947-1237354 Cucumis sativus
Cucsa.095330 0.5kb downstream 0.5kb downstream 500 false scaffold00919: 1234947-1235446 Cucumis sativus
Cucsa.095330 1.0kb upstream 1.0kb upstream 2908 true scaffold00919: 1235447-1238354 Cucumis sativus
Cucsa.095330 1.0kb upstream 1.0kb upstream 1000 false scaffold00919: 1237355-1238354 Cucumis sativus
Cucsa.095330 1.0kb downstream 1.0kb downstream 2908 true scaffold00919: 1234447-1237354 Cucumis sativus
Cucsa.095330 1.0kb downstream 1.0kb downstream 1000 false scaffold00919: 1234447-1235446 Cucumis sativus
Cucsa.095330 2.0kb upstream 2.0kb upstream 3908 true scaffold00919: 1235447-1239354 Cucumis sativus
Cucsa.095330 2.0kb upstream 2.0kb upstream 2000 false scaffold00919: 1237355-1239354 Cucumis sativus
Cucsa.095330 2.0kb downstream 2.0kb downstream 3908 true scaffold00919: 1233447-1237354 Cucumis sativus
Cucsa.095330 2.0kb downstream 2.0kb downstream 2000 false scaffold00919: 1233447-1235446 Cucumis sativus
Cucsa.095330 5.0kb upstream 5.0kb upstream 6908 true scaffold00919: 1235447-1242354 Cucumis sativus
Cucsa.095330 5.0kb upstream 5.0kb upstream 5000 false scaffold00919: 1237355-1242354 Cucumis sativus
Cucsa.095330 5.0kb downstream 5.0kb downstream 6908 true scaffold00919: 1230447-1237354 Cucumis sativus
Cucsa.095330 5.0kb downstream 5.0kb downstream 5000 false scaffold00919: 1230447-1235446 Cucumis sativus
Cucsa.095330 10.0kb upstream 10.0kb upstream 11908 true scaffold00919: 1235447-1247354 Cucumis sativus
Cucsa.095330 10.0kb upstream 10.0kb upstream 10000 false scaffold00919: 1237355-1247354 Cucumis sativus
Cucsa.095330 10.0kb downstream 10.0kb downstream 11908 true scaffold00919: 1225447-1237354 Cucumis sativus
Cucsa.095330 10.0kb downstream 10.0kb downstream 10000 false scaffold00919: 1225447-1235446 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302504 5265 Fabidae View MSA
124072363 5270 Rosid View MSA
123740411 5271 Pentapetalae View MSA
122793387 5272 Eudicot View MSA
122048876 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain