Gene : AT1G68930 A. thaliana TAIR10
Defline:  (1 of 61) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  5850
Name:  ? AT1G68930 Secondary Identifier:  ? PAC:19656367
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G68930 0.5kb upstream 0.5kb upstream 2732 true Chr1: 25917814-25920545 Arabidopsis thaliana
AT1G68930 0.5kb upstream 0.5kb upstream 500 false Chr1: 25917814-25918313 Arabidopsis thaliana
AT1G68930 0.5kb downstream 0.5kb downstream 2732 true Chr1: 25918314-25921045 Arabidopsis thaliana
AT1G68930 0.5kb downstream 0.5kb downstream 500 false Chr1: 25920546-25921045 Arabidopsis thaliana
AT1G68930 1.0kb upstream 1.0kb upstream 3232 true Chr1: 25917314-25920545 Arabidopsis thaliana
AT1G68930 1.0kb upstream 1.0kb upstream 1000 false Chr1: 25917314-25918313 Arabidopsis thaliana
AT1G68930 1.0kb downstream 1.0kb downstream 3232 true Chr1: 25918314-25921545 Arabidopsis thaliana
AT1G68930 1.0kb downstream 1.0kb downstream 1000 false Chr1: 25920546-25921545 Arabidopsis thaliana
AT1G68930 2.0kb upstream 2.0kb upstream 4232 true Chr1: 25916314-25920545 Arabidopsis thaliana
AT1G68930 2.0kb upstream 2.0kb upstream 2000 false Chr1: 25916314-25918313 Arabidopsis thaliana
AT1G68930 2.0kb downstream 2.0kb downstream 4232 true Chr1: 25918314-25922545 Arabidopsis thaliana
AT1G68930 2.0kb downstream 2.0kb downstream 2000 false Chr1: 25920546-25922545 Arabidopsis thaliana
AT1G68930 5.0kb upstream 5.0kb upstream 7232 true Chr1: 25913314-25920545 Arabidopsis thaliana
AT1G68930 5.0kb upstream 5.0kb upstream 5000 false Chr1: 25913314-25918313 Arabidopsis thaliana
AT1G68930 5.0kb downstream 5.0kb downstream 7232 true Chr1: 25918314-25925545 Arabidopsis thaliana
AT1G68930 5.0kb downstream 5.0kb downstream 5000 false Chr1: 25920546-25925545 Arabidopsis thaliana
AT1G68930 10.0kb upstream 10.0kb upstream 12232 true Chr1: 25908314-25920545 Arabidopsis thaliana
AT1G68930 10.0kb upstream 10.0kb upstream 10000 false Chr1: 25908314-25918313 Arabidopsis thaliana
AT1G68930 10.0kb downstream 10.0kb downstream 12232 true Chr1: 25918314-25930545 Arabidopsis thaliana
AT1G68930 10.0kb downstream 10.0kb downstream 10000 false Chr1: 25920546-25930545 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366610 5261 Brassicaceae View MSA
123829217 5264 Brassicales-Malvales View MSA
124340552 5266 SBM View MSA
124252704 5268 Malvidae View MSA
124072363 5270 Rosid View MSA
123740411 5271 Pentapetalae View MSA
122793387 5272 Eudicot View MSA
122048876 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.461        
cufflinks 1.495        
cufflinks 0.896        
cufflinks 1.423        
cufflinks 0.763       Low
cufflinks 1.45        

0 Strain