Gene : Cagra.1418s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22952:SF149 - BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  4
Name:  ? Cagra.1418s0004 Secondary Identifier:  ? PAC:28915003
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1418s0004 0.5kb upstream 0.5kb upstream 938 true Scaffold1418: 17740-18677 Capsella grandiflora
Cagra.1418s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1418: 18178-18677 Capsella grandiflora
Cagra.1418s0004 0.5kb downstream 0.5kb downstream 938 true Scaffold1418: 17240-18177 Capsella grandiflora
Cagra.1418s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1418: 17240-17739 Capsella grandiflora
Cagra.1418s0004 1.0kb upstream 1.0kb upstream 1438 true Scaffold1418: 17740-19177 Capsella grandiflora
Cagra.1418s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1418: 18178-19177 Capsella grandiflora
Cagra.1418s0004 1.0kb downstream 1.0kb downstream 1438 true Scaffold1418: 16740-18177 Capsella grandiflora
Cagra.1418s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1418: 16740-17739 Capsella grandiflora
Cagra.1418s0004 2.0kb upstream 2.0kb upstream 2438 true Scaffold1418: 17740-20177 Capsella grandiflora
Cagra.1418s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1418: 18178-20177 Capsella grandiflora
Cagra.1418s0004 2.0kb downstream 2.0kb downstream 2438 true Scaffold1418: 15740-18177 Capsella grandiflora
Cagra.1418s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1418: 15740-17739 Capsella grandiflora
Cagra.1418s0004 5.0kb upstream 5.0kb upstream 5438 true Scaffold1418: 17740-23177 Capsella grandiflora
Cagra.1418s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1418: 18178-23177 Capsella grandiflora
Cagra.1418s0004 5.0kb downstream 5.0kb downstream 5438 true Scaffold1418: 12740-18177 Capsella grandiflora
Cagra.1418s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1418: 12740-17739 Capsella grandiflora
Cagra.1418s0004 10.0kb upstream 10.0kb upstream 10438 true Scaffold1418: 17740-28177 Capsella grandiflora
Cagra.1418s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1418: 18178-28177 Capsella grandiflora
Cagra.1418s0004 10.0kb downstream 10.0kb downstream 10438 true Scaffold1418: 7740-18177 Capsella grandiflora
Cagra.1418s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1418: 7740-17739 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372473 5261 Brassicaceae View MSA
123830186 5264 Brassicales-Malvales View MSA
124340092 5266 SBM View MSA
124239758 5268 Malvidae View MSA
124074698 5270 Rosid View MSA
123742420 5271 Pentapetalae View MSA
122791799 5272 Eudicot View MSA
122049154 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain