Gene : Cagra.1398s0039 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31374:SF34 - F6F9.11 PROTEIN-RELATED Genomic Order:  39
Name:  ? Cagra.1398s0039 Secondary Identifier:  ? PAC:28913475
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1398s0039 0.5kb upstream 0.5kb upstream 947 true Scaffold1398: 126430-127376 Capsella grandiflora
Cagra.1398s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold1398: 126430-126929 Capsella grandiflora
Cagra.1398s0039 0.5kb downstream 0.5kb downstream 947 true Scaffold1398: 126930-127876 Capsella grandiflora
Cagra.1398s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold1398: 127377-127876 Capsella grandiflora
Cagra.1398s0039 1.0kb upstream 1.0kb upstream 1447 true Scaffold1398: 125930-127376 Capsella grandiflora
Cagra.1398s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold1398: 125930-126929 Capsella grandiflora
Cagra.1398s0039 1.0kb downstream 1.0kb downstream 1447 true Scaffold1398: 126930-128376 Capsella grandiflora
Cagra.1398s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold1398: 127377-128376 Capsella grandiflora
Cagra.1398s0039 2.0kb upstream 2.0kb upstream 2447 true Scaffold1398: 124930-127376 Capsella grandiflora
Cagra.1398s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold1398: 124930-126929 Capsella grandiflora
Cagra.1398s0039 2.0kb downstream 2.0kb downstream 2447 true Scaffold1398: 126930-129376 Capsella grandiflora
Cagra.1398s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold1398: 127377-129376 Capsella grandiflora
Cagra.1398s0039 5.0kb upstream 5.0kb upstream 5447 true Scaffold1398: 121930-127376 Capsella grandiflora
Cagra.1398s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold1398: 121930-126929 Capsella grandiflora
Cagra.1398s0039 5.0kb downstream 5.0kb downstream 5447 true Scaffold1398: 126930-132376 Capsella grandiflora
Cagra.1398s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold1398: 127377-132376 Capsella grandiflora
Cagra.1398s0039 10.0kb upstream 10.0kb upstream 10447 true Scaffold1398: 116930-127376 Capsella grandiflora
Cagra.1398s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold1398: 116930-126929 Capsella grandiflora
Cagra.1398s0039 10.0kb downstream 10.0kb downstream 10447 true Scaffold1398: 126930-137376 Capsella grandiflora
Cagra.1398s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold1398: 127377-137376 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371712 5261 Brassicaceae View MSA
123800217 5264 Brassicales-Malvales View MSA
124297659 5266 SBM View MSA
124149490 5268 Malvidae View MSA
123875291 5270 Rosid View MSA
123753658 5271 Pentapetalae View MSA
122788307 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain