Gene : Cagra.14002s0005 C. grandiflora v1.1
Defline:  (1 of 11) PTHR11926:SF242 - UDP-GLYCOSYLTRANSFERASE 71B2-RELATED Genomic Order:  5
Name:  ? Cagra.14002s0005 Secondary Identifier:  ? PAC:28903832
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7186 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.14002s0005 0.5kb upstream 0.5kb upstream 1943 true Scaffold14002: 7438-9380 Capsella grandiflora
Cagra.14002s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold14002: 7438-7937 Capsella grandiflora
Cagra.14002s0005 0.5kb downstream 0.5kb downstream 1943 true Scaffold14002: 7938-9880 Capsella grandiflora
Cagra.14002s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold14002: 9381-9880 Capsella grandiflora
Cagra.14002s0005 1.0kb upstream 1.0kb upstream 2443 true Scaffold14002: 6938-9380 Capsella grandiflora
Cagra.14002s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold14002: 6938-7937 Capsella grandiflora
Cagra.14002s0005 1.0kb downstream 1.0kb downstream 2443 true Scaffold14002: 7938-10380 Capsella grandiflora
Cagra.14002s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold14002: 9381-10380 Capsella grandiflora
Cagra.14002s0005 2.0kb upstream 2.0kb upstream 3443 true Scaffold14002: 5938-9380 Capsella grandiflora
Cagra.14002s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold14002: 5938-7937 Capsella grandiflora
Cagra.14002s0005 2.0kb downstream 2.0kb downstream 3443 true Scaffold14002: 7938-11380 Capsella grandiflora
Cagra.14002s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold14002: 9381-11380 Capsella grandiflora
Cagra.14002s0005 5.0kb upstream 5.0kb upstream 6443 true Scaffold14002: 2938-9380 Capsella grandiflora
Cagra.14002s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold14002: 2938-7937 Capsella grandiflora
Cagra.14002s0005 5.0kb downstream 5.0kb downstream 6443 true Scaffold14002: 7938-14380 Capsella grandiflora
Cagra.14002s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold14002: 9381-14380 Capsella grandiflora
Cagra.14002s0005 10.0kb upstream 10.0kb upstream 9380 true Scaffold14002: 1-9380 Capsella grandiflora
Cagra.14002s0005 10.0kb upstream 10.0kb upstream 7937 false Scaffold14002: 1-7937 Capsella grandiflora
Cagra.14002s0005 10.0kb downstream 10.0kb downstream 11443 true Scaffold14002: 7938-19380 Capsella grandiflora
Cagra.14002s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold14002: 9381-19380 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379743 5261 Brassicaceae View MSA
123802398 5264 Brassicales-Malvales View MSA
124299596 5266 SBM View MSA
124150969 5268 Malvidae View MSA
123876494 5270 Rosid View MSA
123749045 5271 Pentapetalae View MSA
122796791 5272 Eudicot View MSA
122049066 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain