Gene : Cagra.1504s0050 C. grandiflora v1.1
Defline:  (1 of 6) 3.5.1.52 - Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase / N-oligosaccharide glycopeptidase Genomic Order:  50
Name:  ? Cagra.1504s0050 Secondary Identifier:  ? PAC:28910293
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1504s0050 0.5kb upstream 0.5kb upstream 2306 true Scaffold1504: 162527-164832 Capsella grandiflora
Cagra.1504s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold1504: 164333-164832 Capsella grandiflora
Cagra.1504s0050 0.5kb downstream 0.5kb downstream 2306 true Scaffold1504: 162027-164332 Capsella grandiflora
Cagra.1504s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold1504: 162027-162526 Capsella grandiflora
Cagra.1504s0050 1.0kb upstream 1.0kb upstream 2806 true Scaffold1504: 162527-165332 Capsella grandiflora
Cagra.1504s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold1504: 164333-165332 Capsella grandiflora
Cagra.1504s0050 1.0kb downstream 1.0kb downstream 2806 true Scaffold1504: 161527-164332 Capsella grandiflora
Cagra.1504s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold1504: 161527-162526 Capsella grandiflora
Cagra.1504s0050 2.0kb upstream 2.0kb upstream 3806 true Scaffold1504: 162527-166332 Capsella grandiflora
Cagra.1504s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold1504: 164333-166332 Capsella grandiflora
Cagra.1504s0050 2.0kb downstream 2.0kb downstream 3806 true Scaffold1504: 160527-164332 Capsella grandiflora
Cagra.1504s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold1504: 160527-162526 Capsella grandiflora
Cagra.1504s0050 5.0kb upstream 5.0kb upstream 6806 true Scaffold1504: 162527-169332 Capsella grandiflora
Cagra.1504s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold1504: 164333-169332 Capsella grandiflora
Cagra.1504s0050 5.0kb downstream 5.0kb downstream 6806 true Scaffold1504: 157527-164332 Capsella grandiflora
Cagra.1504s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold1504: 157527-162526 Capsella grandiflora
Cagra.1504s0050 10.0kb upstream 10.0kb upstream 11806 true Scaffold1504: 162527-174332 Capsella grandiflora
Cagra.1504s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold1504: 164333-174332 Capsella grandiflora
Cagra.1504s0050 10.0kb downstream 10.0kb downstream 11806 true Scaffold1504: 152527-164332 Capsella grandiflora
Cagra.1504s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold1504: 152527-162526 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372784 5261 Brassicaceae View MSA
123839595 5264 Brassicales-Malvales View MSA
124345963 5266 SBM View MSA
124254669 5268 Malvidae View MSA
124072866 5270 Rosid View MSA
123749062 5271 Pentapetalae View MSA
122793704 5272 Eudicot View MSA
122047638 5273 Angiosperm View MSA
121344579 5274 Embryophyte View MSA
123380069 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain