Gene : Cagra.1472s0014 C. grandiflora v1.1
Defline:  (1 of 132) PF00847 - AP2 domain (AP2) Genomic Order:  14
Name:  ? Cagra.1472s0014 Secondary Identifier:  ? PAC:28904806
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Ontology Annotation Displayer

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Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1472s0014 0.5kb upstream 0.5kb upstream 1446 true Scaffold1472: 52719-54164 Capsella grandiflora
Cagra.1472s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold1472: 52719-53218 Capsella grandiflora
Cagra.1472s0014 0.5kb downstream 0.5kb downstream 1446 true Scaffold1472: 53219-54664 Capsella grandiflora
Cagra.1472s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold1472: 54165-54664 Capsella grandiflora
Cagra.1472s0014 1.0kb upstream 1.0kb upstream 1946 true Scaffold1472: 52219-54164 Capsella grandiflora
Cagra.1472s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold1472: 52219-53218 Capsella grandiflora
Cagra.1472s0014 1.0kb downstream 1.0kb downstream 1946 true Scaffold1472: 53219-55164 Capsella grandiflora
Cagra.1472s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold1472: 54165-55164 Capsella grandiflora
Cagra.1472s0014 2.0kb upstream 2.0kb upstream 2946 true Scaffold1472: 51219-54164 Capsella grandiflora
Cagra.1472s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold1472: 51219-53218 Capsella grandiflora
Cagra.1472s0014 2.0kb downstream 2.0kb downstream 2946 true Scaffold1472: 53219-56164 Capsella grandiflora
Cagra.1472s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold1472: 54165-56164 Capsella grandiflora
Cagra.1472s0014 5.0kb upstream 5.0kb upstream 5946 true Scaffold1472: 48219-54164 Capsella grandiflora
Cagra.1472s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold1472: 48219-53218 Capsella grandiflora
Cagra.1472s0014 5.0kb downstream 5.0kb downstream 5946 true Scaffold1472: 53219-59164 Capsella grandiflora
Cagra.1472s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold1472: 54165-59164 Capsella grandiflora
Cagra.1472s0014 10.0kb upstream 10.0kb upstream 10946 true Scaffold1472: 43219-54164 Capsella grandiflora
Cagra.1472s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold1472: 43219-53218 Capsella grandiflora
Cagra.1472s0014 10.0kb downstream 10.0kb downstream 10946 true Scaffold1472: 53219-64164 Capsella grandiflora
Cagra.1472s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold1472: 54165-64164 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367871 5261 Brassicaceae View MSA
123837956 5264 Brassicales-Malvales View MSA
124342412 5266 SBM View MSA
124252635 5268 Malvidae View MSA
124071408 5270 Rosid View MSA
123744061 5271 Pentapetalae View MSA
122791719 5272 Eudicot View MSA
122049614 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain