Gene : Cagra.15322s0003 C. grandiflora v1.1
Defline:  (1 of 11) PF00560//PF07714//PF08263 - Leucine Rich Repeat (LRR_1) // Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  3
Name:  ? Cagra.15322s0003 Secondary Identifier:  ? PAC:28902481
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15322s0003 0.5kb upstream 0.5kb upstream 2697 true Scaffold15322: 13191-15887 Capsella grandiflora
Cagra.15322s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold15322: 13191-13690 Capsella grandiflora
Cagra.15322s0003 0.5kb downstream 0.5kb downstream 2697 true Scaffold15322: 13691-16387 Capsella grandiflora
Cagra.15322s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold15322: 15888-16387 Capsella grandiflora
Cagra.15322s0003 1.0kb upstream 1.0kb upstream 3197 true Scaffold15322: 12691-15887 Capsella grandiflora
Cagra.15322s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold15322: 12691-13690 Capsella grandiflora
Cagra.15322s0003 1.0kb downstream 1.0kb downstream 3197 true Scaffold15322: 13691-16887 Capsella grandiflora
Cagra.15322s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold15322: 15888-16887 Capsella grandiflora
Cagra.15322s0003 2.0kb upstream 2.0kb upstream 4197 true Scaffold15322: 11691-15887 Capsella grandiflora
Cagra.15322s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold15322: 11691-13690 Capsella grandiflora
Cagra.15322s0003 2.0kb downstream 2.0kb downstream 4197 true Scaffold15322: 13691-17887 Capsella grandiflora
Cagra.15322s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold15322: 15888-17887 Capsella grandiflora
Cagra.15322s0003 5.0kb upstream 5.0kb upstream 7197 true Scaffold15322: 8691-15887 Capsella grandiflora
Cagra.15322s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold15322: 8691-13690 Capsella grandiflora
Cagra.15322s0003 5.0kb downstream 5.0kb downstream 7197 true Scaffold15322: 13691-20887 Capsella grandiflora
Cagra.15322s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold15322: 15888-20887 Capsella grandiflora
Cagra.15322s0003 10.0kb upstream 10.0kb upstream 12197 true Scaffold15322: 3691-15887 Capsella grandiflora
Cagra.15322s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold15322: 3691-13690 Capsella grandiflora
Cagra.15322s0003 10.0kb downstream 10.0kb downstream 12197 true Scaffold15322: 13691-25887 Capsella grandiflora
Cagra.15322s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold15322: 15888-25887 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362731 5261 Brassicaceae View MSA
123834545 5264 Brassicales-Malvales View MSA
124343267 5266 SBM View MSA
124238301 5268 Malvidae View MSA
124071838 5270 Rosid View MSA
123750976 5271 Pentapetalae View MSA
122795298 5272 Eudicot View MSA
122046399 5273 Angiosperm View MSA
121346190 5274 Embryophyte View MSA
123380345 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain