Gene : Cagra.1517s0030 C. grandiflora v1.1
Defline:  (1 of 46) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  30
Name:  ? Cagra.1517s0030 Secondary Identifier:  ? PAC:28899385
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1517s0030 0.5kb upstream 0.5kb upstream 1366 true Scaffold1517: 88779-90144 Capsella grandiflora
Cagra.1517s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold1517: 88779-89278 Capsella grandiflora
Cagra.1517s0030 0.5kb downstream 0.5kb downstream 1366 true Scaffold1517: 89279-90644 Capsella grandiflora
Cagra.1517s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold1517: 90145-90644 Capsella grandiflora
Cagra.1517s0030 1.0kb upstream 1.0kb upstream 1866 true Scaffold1517: 88279-90144 Capsella grandiflora
Cagra.1517s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold1517: 88279-89278 Capsella grandiflora
Cagra.1517s0030 1.0kb downstream 1.0kb downstream 1866 true Scaffold1517: 89279-91144 Capsella grandiflora
Cagra.1517s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold1517: 90145-91144 Capsella grandiflora
Cagra.1517s0030 2.0kb upstream 2.0kb upstream 2866 true Scaffold1517: 87279-90144 Capsella grandiflora
Cagra.1517s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold1517: 87279-89278 Capsella grandiflora
Cagra.1517s0030 2.0kb downstream 2.0kb downstream 2866 true Scaffold1517: 89279-92144 Capsella grandiflora
Cagra.1517s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold1517: 90145-92144 Capsella grandiflora
Cagra.1517s0030 5.0kb upstream 5.0kb upstream 5866 true Scaffold1517: 84279-90144 Capsella grandiflora
Cagra.1517s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold1517: 84279-89278 Capsella grandiflora
Cagra.1517s0030 5.0kb downstream 5.0kb downstream 5866 true Scaffold1517: 89279-95144 Capsella grandiflora
Cagra.1517s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold1517: 90145-95144 Capsella grandiflora
Cagra.1517s0030 10.0kb upstream 10.0kb upstream 10866 true Scaffold1517: 79279-90144 Capsella grandiflora
Cagra.1517s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold1517: 79279-89278 Capsella grandiflora
Cagra.1517s0030 10.0kb downstream 10.0kb downstream 10866 true Scaffold1517: 89279-100144 Capsella grandiflora
Cagra.1517s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold1517: 90145-100144 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780155 5273 Angiosperm View MSA
122360945 5261 Brassicaceae View MSA
123798069 5264 Brassicales-Malvales View MSA
124295749 5266 SBM View MSA
124148100 5268 Malvidae View MSA
124074311 5270 Rosid View MSA
123745303 5271 Pentapetalae View MSA
122771446 5272 Eudicot View MSA
121051779 5274 Embryophyte View MSA
123091853 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain