Gene : Cagra.15862s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33450:SF5 - EMB Genomic Order:  1
Name:  ? Cagra.15862s0001 Secondary Identifier:  ? PAC:28894782
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15862s0001 0.5kb upstream 0.5kb upstream 957 true Scaffold15862: 2295-3251 Capsella grandiflora
Cagra.15862s0001 0.5kb upstream 0.5kb upstream 381 false Scaffold15862: 2871-3251 Capsella grandiflora
Cagra.15862s0001 0.5kb downstream 0.5kb downstream 1076 true Scaffold15862: 1795-2870 Capsella grandiflora
Cagra.15862s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold15862: 1795-2294 Capsella grandiflora
Cagra.15862s0001 1.0kb upstream 1.0kb upstream 957 true Scaffold15862: 2295-3251 Capsella grandiflora
Cagra.15862s0001 1.0kb upstream 1.0kb upstream 381 false Scaffold15862: 2871-3251 Capsella grandiflora
Cagra.15862s0001 1.0kb downstream 1.0kb downstream 1576 true Scaffold15862: 1295-2870 Capsella grandiflora
Cagra.15862s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold15862: 1295-2294 Capsella grandiflora
Cagra.15862s0001 2.0kb upstream 2.0kb upstream 957 true Scaffold15862: 2295-3251 Capsella grandiflora
Cagra.15862s0001 2.0kb upstream 2.0kb upstream 381 false Scaffold15862: 2871-3251 Capsella grandiflora
Cagra.15862s0001 2.0kb downstream 2.0kb downstream 2576 true Scaffold15862: 295-2870 Capsella grandiflora
Cagra.15862s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold15862: 295-2294 Capsella grandiflora
Cagra.15862s0001 5.0kb upstream 5.0kb upstream 957 true Scaffold15862: 2295-3251 Capsella grandiflora
Cagra.15862s0001 5.0kb upstream 5.0kb upstream 381 false Scaffold15862: 2871-3251 Capsella grandiflora
Cagra.15862s0001 5.0kb downstream 5.0kb downstream 2870 true Scaffold15862: 1-2870 Capsella grandiflora
Cagra.15862s0001 5.0kb downstream 5.0kb downstream 2294 false Scaffold15862: 1-2294 Capsella grandiflora
Cagra.15862s0001 10.0kb upstream 10.0kb upstream 957 true Scaffold15862: 2295-3251 Capsella grandiflora
Cagra.15862s0001 10.0kb upstream 10.0kb upstream 381 false Scaffold15862: 2871-3251 Capsella grandiflora
Cagra.15862s0001 10.0kb downstream 10.0kb downstream 2870 true Scaffold15862: 1-2870 Capsella grandiflora
Cagra.15862s0001 10.0kb downstream 10.0kb downstream 2294 false Scaffold15862: 1-2294 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124349299 5266 SBM View MSA
122373927 5261 Brassicaceae View MSA
123836680 5264 Brassicales-Malvales View MSA
124250333 5268 Malvidae View MSA
124062808 5270 Rosid View MSA
123743467 5271 Pentapetalae View MSA
122796420 5272 Eudicot View MSA
122046487 5273 Angiosperm View MSA
121310612 5274 Embryophyte View MSA
123348052 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain