Gene : Cagra.1658s0012 C. grandiflora v1.1
Defline:  (1 of 3) PTHR14155:SF99 - RING-H2 FINGER PROTEIN ATL3 Genomic Order:  12
Name:  ? Cagra.1658s0012 Secondary Identifier:  ? PAC:28907207
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1658s0012 0.5kb upstream 0.5kb upstream 1653 true Scaffold1658: 32520-34172 Capsella grandiflora
Cagra.1658s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold1658: 32520-33019 Capsella grandiflora
Cagra.1658s0012 0.5kb downstream 0.5kb downstream 1653 true Scaffold1658: 33020-34672 Capsella grandiflora
Cagra.1658s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold1658: 34173-34672 Capsella grandiflora
Cagra.1658s0012 1.0kb upstream 1.0kb upstream 2153 true Scaffold1658: 32020-34172 Capsella grandiflora
Cagra.1658s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold1658: 32020-33019 Capsella grandiflora
Cagra.1658s0012 1.0kb downstream 1.0kb downstream 2153 true Scaffold1658: 33020-35172 Capsella grandiflora
Cagra.1658s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold1658: 34173-35172 Capsella grandiflora
Cagra.1658s0012 2.0kb upstream 2.0kb upstream 3153 true Scaffold1658: 31020-34172 Capsella grandiflora
Cagra.1658s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold1658: 31020-33019 Capsella grandiflora
Cagra.1658s0012 2.0kb downstream 2.0kb downstream 3153 true Scaffold1658: 33020-36172 Capsella grandiflora
Cagra.1658s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold1658: 34173-36172 Capsella grandiflora
Cagra.1658s0012 5.0kb upstream 5.0kb upstream 6153 true Scaffold1658: 28020-34172 Capsella grandiflora
Cagra.1658s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold1658: 28020-33019 Capsella grandiflora
Cagra.1658s0012 5.0kb downstream 5.0kb downstream 6153 true Scaffold1658: 33020-39172 Capsella grandiflora
Cagra.1658s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold1658: 34173-39172 Capsella grandiflora
Cagra.1658s0012 10.0kb upstream 10.0kb upstream 11153 true Scaffold1658: 23020-34172 Capsella grandiflora
Cagra.1658s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold1658: 23020-33019 Capsella grandiflora
Cagra.1658s0012 10.0kb downstream 10.0kb downstream 11153 true Scaffold1658: 33020-44172 Capsella grandiflora
Cagra.1658s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold1658: 34173-44172 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371206 5261 Brassicaceae View MSA
123838599 5264 Brassicales-Malvales View MSA
124337079 5266 SBM View MSA
124239102 5268 Malvidae View MSA
124069328 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain