Gene : Cagra.1674s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31852:SF48 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Genomic Order:  4
Name:  ? Cagra.1674s0004 Secondary Identifier:  ? PAC:28896435
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1674s0004 0.5kb upstream 0.5kb upstream 1451 true Scaffold1674: 41869-43319 Capsella grandiflora
Cagra.1674s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1674: 41869-42368 Capsella grandiflora
Cagra.1674s0004 0.5kb downstream 0.5kb downstream 1185 true Scaffold1674: 42369-43553 Capsella grandiflora
Cagra.1674s0004 0.5kb downstream 0.5kb downstream 234 false Scaffold1674: 43320-43553 Capsella grandiflora
Cagra.1674s0004 1.0kb upstream 1.0kb upstream 1951 true Scaffold1674: 41369-43319 Capsella grandiflora
Cagra.1674s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1674: 41369-42368 Capsella grandiflora
Cagra.1674s0004 1.0kb downstream 1.0kb downstream 1185 true Scaffold1674: 42369-43553 Capsella grandiflora
Cagra.1674s0004 1.0kb downstream 1.0kb downstream 234 false Scaffold1674: 43320-43553 Capsella grandiflora
Cagra.1674s0004 2.0kb upstream 2.0kb upstream 2951 true Scaffold1674: 40369-43319 Capsella grandiflora
Cagra.1674s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1674: 40369-42368 Capsella grandiflora
Cagra.1674s0004 2.0kb downstream 2.0kb downstream 1185 true Scaffold1674: 42369-43553 Capsella grandiflora
Cagra.1674s0004 2.0kb downstream 2.0kb downstream 234 false Scaffold1674: 43320-43553 Capsella grandiflora
Cagra.1674s0004 5.0kb upstream 5.0kb upstream 5951 true Scaffold1674: 37369-43319 Capsella grandiflora
Cagra.1674s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1674: 37369-42368 Capsella grandiflora
Cagra.1674s0004 5.0kb downstream 5.0kb downstream 1185 true Scaffold1674: 42369-43553 Capsella grandiflora
Cagra.1674s0004 5.0kb downstream 5.0kb downstream 234 false Scaffold1674: 43320-43553 Capsella grandiflora
Cagra.1674s0004 10.0kb upstream 10.0kb upstream 10951 true Scaffold1674: 32369-43319 Capsella grandiflora
Cagra.1674s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1674: 32369-42368 Capsella grandiflora
Cagra.1674s0004 10.0kb downstream 10.0kb downstream 1185 true Scaffold1674: 42369-43553 Capsella grandiflora
Cagra.1674s0004 10.0kb downstream 10.0kb downstream 234 false Scaffold1674: 43320-43553 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361777 5261 Brassicaceae View MSA
123835991 5264 Brassicales-Malvales View MSA
124341177 5266 SBM View MSA
124239946 5268 Malvidae View MSA
124070959 5270 Rosid View MSA
123751487 5271 Pentapetalae View MSA
122787858 5272 Eudicot View MSA
122044505 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain