Gene : Cagra.1681s0033 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11945:SF240 - AGAMOUS-LIKE MADS-BOX PROTEIN-RELATED Genomic Order:  33
Name:  ? Cagra.1681s0033 Secondary Identifier:  ? PAC:28905289
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1681s0033 0.5kb upstream 0.5kb upstream 1730 true Scaffold1681: 118076-119805 Capsella grandiflora
Cagra.1681s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold1681: 119306-119805 Capsella grandiflora
Cagra.1681s0033 0.5kb downstream 0.5kb downstream 1730 true Scaffold1681: 117576-119305 Capsella grandiflora
Cagra.1681s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold1681: 117576-118075 Capsella grandiflora
Cagra.1681s0033 1.0kb upstream 1.0kb upstream 2230 true Scaffold1681: 118076-120305 Capsella grandiflora
Cagra.1681s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold1681: 119306-120305 Capsella grandiflora
Cagra.1681s0033 1.0kb downstream 1.0kb downstream 2230 true Scaffold1681: 117076-119305 Capsella grandiflora
Cagra.1681s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold1681: 117076-118075 Capsella grandiflora
Cagra.1681s0033 2.0kb upstream 2.0kb upstream 3230 true Scaffold1681: 118076-121305 Capsella grandiflora
Cagra.1681s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold1681: 119306-121305 Capsella grandiflora
Cagra.1681s0033 2.0kb downstream 2.0kb downstream 3230 true Scaffold1681: 116076-119305 Capsella grandiflora
Cagra.1681s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold1681: 116076-118075 Capsella grandiflora
Cagra.1681s0033 5.0kb upstream 5.0kb upstream 6230 true Scaffold1681: 118076-124305 Capsella grandiflora
Cagra.1681s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold1681: 119306-124305 Capsella grandiflora
Cagra.1681s0033 5.0kb downstream 5.0kb downstream 6230 true Scaffold1681: 113076-119305 Capsella grandiflora
Cagra.1681s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold1681: 113076-118075 Capsella grandiflora
Cagra.1681s0033 10.0kb upstream 10.0kb upstream 11230 true Scaffold1681: 118076-129305 Capsella grandiflora
Cagra.1681s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold1681: 119306-129305 Capsella grandiflora
Cagra.1681s0033 10.0kb downstream 10.0kb downstream 11230 true Scaffold1681: 108076-119305 Capsella grandiflora
Cagra.1681s0033 10.0kb downstream 10.0kb downstream 10000 false Scaffold1681: 108076-118075 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371631 5261 Brassicaceae View MSA
123800202 5264 Brassicales-Malvales View MSA
124297646 5266 SBM View MSA
124252728 5268 Malvidae View MSA
124074162 5270 Rosid View MSA
123746234 5271 Pentapetalae View MSA
122797377 5272 Eudicot View MSA
122048647 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain