Gene : Cagra.1671s0398 C. grandiflora v1.1
Defline:  (1 of 6) PTHR33214:SF7 - BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED Genomic Order:  398
Name:  ? Cagra.1671s0398 Secondary Identifier:  ? PAC:28913953
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0398 0.5kb upstream 0.5kb upstream 788 true Scaffold1671: 1434674-1435461 Capsella grandiflora
Cagra.1671s0398 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 1434674-1435173 Capsella grandiflora
Cagra.1671s0398 0.5kb downstream 0.5kb downstream 788 true Scaffold1671: 1435174-1435961 Capsella grandiflora
Cagra.1671s0398 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 1435462-1435961 Capsella grandiflora
Cagra.1671s0398 1.0kb upstream 1.0kb upstream 1288 true Scaffold1671: 1434174-1435461 Capsella grandiflora
Cagra.1671s0398 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 1434174-1435173 Capsella grandiflora
Cagra.1671s0398 1.0kb downstream 1.0kb downstream 1288 true Scaffold1671: 1435174-1436461 Capsella grandiflora
Cagra.1671s0398 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 1435462-1436461 Capsella grandiflora
Cagra.1671s0398 2.0kb upstream 2.0kb upstream 2288 true Scaffold1671: 1433174-1435461 Capsella grandiflora
Cagra.1671s0398 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 1433174-1435173 Capsella grandiflora
Cagra.1671s0398 2.0kb downstream 2.0kb downstream 2288 true Scaffold1671: 1435174-1437461 Capsella grandiflora
Cagra.1671s0398 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 1435462-1437461 Capsella grandiflora
Cagra.1671s0398 5.0kb upstream 5.0kb upstream 5288 true Scaffold1671: 1430174-1435461 Capsella grandiflora
Cagra.1671s0398 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 1430174-1435173 Capsella grandiflora
Cagra.1671s0398 5.0kb downstream 5.0kb downstream 5288 true Scaffold1671: 1435174-1440461 Capsella grandiflora
Cagra.1671s0398 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 1435462-1440461 Capsella grandiflora
Cagra.1671s0398 10.0kb upstream 10.0kb upstream 10288 true Scaffold1671: 1425174-1435461 Capsella grandiflora
Cagra.1671s0398 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 1425174-1435173 Capsella grandiflora
Cagra.1671s0398 10.0kb downstream 10.0kb downstream 10288 true Scaffold1671: 1435174-1445461 Capsella grandiflora
Cagra.1671s0398 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 1435462-1445461 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381748 5261 Brassicaceae View MSA
123803417 5264 Brassicales-Malvales View MSA
124300529 5266 SBM View MSA
124250916 5268 Malvidae View MSA
124071320 5270 Rosid View MSA
123749514 5271 Pentapetalae View MSA
122786269 5272 Eudicot View MSA
122049999 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain