Gene : Cagra.1671s0123 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22951:SF26 - CLATHRIN COAT ASSEMBLY PROTEIN AP180 Genomic Order:  123
Name:  ? Cagra.1671s0123 Secondary Identifier:  ? PAC:28913931
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0123 0.5kb upstream 0.5kb upstream 2725 true Scaffold1671: 471375-474099 Capsella grandiflora
Cagra.1671s0123 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 473600-474099 Capsella grandiflora
Cagra.1671s0123 0.5kb downstream 0.5kb downstream 2725 true Scaffold1671: 470875-473599 Capsella grandiflora
Cagra.1671s0123 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 470875-471374 Capsella grandiflora
Cagra.1671s0123 1.0kb upstream 1.0kb upstream 3225 true Scaffold1671: 471375-474599 Capsella grandiflora
Cagra.1671s0123 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 473600-474599 Capsella grandiflora
Cagra.1671s0123 1.0kb downstream 1.0kb downstream 3225 true Scaffold1671: 470375-473599 Capsella grandiflora
Cagra.1671s0123 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 470375-471374 Capsella grandiflora
Cagra.1671s0123 2.0kb upstream 2.0kb upstream 4225 true Scaffold1671: 471375-475599 Capsella grandiflora
Cagra.1671s0123 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 473600-475599 Capsella grandiflora
Cagra.1671s0123 2.0kb downstream 2.0kb downstream 4225 true Scaffold1671: 469375-473599 Capsella grandiflora
Cagra.1671s0123 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 469375-471374 Capsella grandiflora
Cagra.1671s0123 5.0kb upstream 5.0kb upstream 7225 true Scaffold1671: 471375-478599 Capsella grandiflora
Cagra.1671s0123 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 473600-478599 Capsella grandiflora
Cagra.1671s0123 5.0kb downstream 5.0kb downstream 7225 true Scaffold1671: 466375-473599 Capsella grandiflora
Cagra.1671s0123 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 466375-471374 Capsella grandiflora
Cagra.1671s0123 10.0kb upstream 10.0kb upstream 12225 true Scaffold1671: 471375-483599 Capsella grandiflora
Cagra.1671s0123 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 473600-483599 Capsella grandiflora
Cagra.1671s0123 10.0kb downstream 10.0kb downstream 12225 true Scaffold1671: 461375-473599 Capsella grandiflora
Cagra.1671s0123 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 461375-471374 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373592 5261 Brassicaceae View MSA
123835674 5264 Brassicales-Malvales View MSA
124336700 5266 SBM View MSA
124251514 5268 Malvidae View MSA
124064845 5270 Rosid View MSA
123748720 5271 Pentapetalae View MSA
122791986 5272 Eudicot View MSA
122050883 5273 Angiosperm View MSA
121351758 5274 Embryophyte View MSA
123382309 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain