Gene : Cagra.1735s0004 C. grandiflora v1.1
Defline:  (1 of 137) PTHR31790:SF10 - F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  4
Name:  ? Cagra.1735s0004 Secondary Identifier:  ? PAC:28908162
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1735s0004 0.5kb upstream 0.5kb upstream 1679 true Scaffold1735: 5537-7215 Capsella grandiflora
Cagra.1735s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1735: 6716-7215 Capsella grandiflora
Cagra.1735s0004 0.5kb downstream 0.5kb downstream 1679 true Scaffold1735: 5037-6715 Capsella grandiflora
Cagra.1735s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1735: 5037-5536 Capsella grandiflora
Cagra.1735s0004 1.0kb upstream 1.0kb upstream 2179 true Scaffold1735: 5537-7715 Capsella grandiflora
Cagra.1735s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1735: 6716-7715 Capsella grandiflora
Cagra.1735s0004 1.0kb downstream 1.0kb downstream 2179 true Scaffold1735: 4537-6715 Capsella grandiflora
Cagra.1735s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1735: 4537-5536 Capsella grandiflora
Cagra.1735s0004 2.0kb upstream 2.0kb upstream 3179 true Scaffold1735: 5537-8715 Capsella grandiflora
Cagra.1735s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1735: 6716-8715 Capsella grandiflora
Cagra.1735s0004 2.0kb downstream 2.0kb downstream 3179 true Scaffold1735: 3537-6715 Capsella grandiflora
Cagra.1735s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1735: 3537-5536 Capsella grandiflora
Cagra.1735s0004 5.0kb upstream 5.0kb upstream 6179 true Scaffold1735: 5537-11715 Capsella grandiflora
Cagra.1735s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1735: 6716-11715 Capsella grandiflora
Cagra.1735s0004 5.0kb downstream 5.0kb downstream 6179 true Scaffold1735: 537-6715 Capsella grandiflora
Cagra.1735s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1735: 537-5536 Capsella grandiflora
Cagra.1735s0004 10.0kb upstream 10.0kb upstream 11179 true Scaffold1735: 5537-16715 Capsella grandiflora
Cagra.1735s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1735: 6716-16715 Capsella grandiflora
Cagra.1735s0004 10.0kb downstream 10.0kb downstream 6715 true Scaffold1735: 1-6715 Capsella grandiflora
Cagra.1735s0004 10.0kb downstream 10.0kb downstream 5536 false Scaffold1735: 1-5536 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379754 5261 Brassicaceae View MSA
123802403 5264 Brassicales-Malvales View MSA
124299601 5266 SBM View MSA
124252683 5268 Malvidae View MSA
124074667 5270 Rosid View MSA
123753263 5271 Pentapetalae View MSA
122797953 5272 Eudicot View MSA
122051694 5273 Angiosperm View MSA
121351156 5274 Embryophyte View MSA
123382030 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain