Gene : Cagra.1714s0005 C. grandiflora v1.1
Defline:  (1 of 6) PTHR32093:SF23 - LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED Genomic Order:  5
Name:  ? Cagra.1714s0005 Secondary Identifier:  ? PAC:28895113
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1714s0005 0.5kb upstream 0.5kb upstream 2960 true Scaffold1714: 23534-26493 Capsella grandiflora
Cagra.1714s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1714: 25994-26493 Capsella grandiflora
Cagra.1714s0005 0.5kb downstream 0.5kb downstream 2960 true Scaffold1714: 23034-25993 Capsella grandiflora
Cagra.1714s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1714: 23034-23533 Capsella grandiflora
Cagra.1714s0005 1.0kb upstream 1.0kb upstream 3460 true Scaffold1714: 23534-26993 Capsella grandiflora
Cagra.1714s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1714: 25994-26993 Capsella grandiflora
Cagra.1714s0005 1.0kb downstream 1.0kb downstream 3460 true Scaffold1714: 22534-25993 Capsella grandiflora
Cagra.1714s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1714: 22534-23533 Capsella grandiflora
Cagra.1714s0005 2.0kb upstream 2.0kb upstream 4460 true Scaffold1714: 23534-27993 Capsella grandiflora
Cagra.1714s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1714: 25994-27993 Capsella grandiflora
Cagra.1714s0005 2.0kb downstream 2.0kb downstream 4460 true Scaffold1714: 21534-25993 Capsella grandiflora
Cagra.1714s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1714: 21534-23533 Capsella grandiflora
Cagra.1714s0005 5.0kb upstream 5.0kb upstream 7460 true Scaffold1714: 23534-30993 Capsella grandiflora
Cagra.1714s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1714: 25994-30993 Capsella grandiflora
Cagra.1714s0005 5.0kb downstream 5.0kb downstream 7460 true Scaffold1714: 18534-25993 Capsella grandiflora
Cagra.1714s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1714: 18534-23533 Capsella grandiflora
Cagra.1714s0005 10.0kb upstream 10.0kb upstream 12460 true Scaffold1714: 23534-35993 Capsella grandiflora
Cagra.1714s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1714: 25994-35993 Capsella grandiflora
Cagra.1714s0005 10.0kb downstream 10.0kb downstream 12460 true Scaffold1714: 13534-25993 Capsella grandiflora
Cagra.1714s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1714: 13534-23533 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343861 5261 Brassicaceae View MSA
123841495 5264 Brassicales-Malvales View MSA
124351661 5266 SBM View MSA
124254554 5268 Malvidae View MSA
124074520 5270 Rosid View MSA
123751287 5271 Pentapetalae View MSA
122794768 5272 Eudicot View MSA
122048760 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121349764 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain