Gene : Cagra.0179s0040 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31238:SF21 - GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 Genomic Order:  40
Name:  ? Cagra.0179s0040 Secondary Identifier:  ? PAC:28909753
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0179s0040 0.5kb upstream 0.5kb upstream 1139 true Scaffold179: 162154-163292 Capsella grandiflora
Cagra.0179s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold179: 162793-163292 Capsella grandiflora
Cagra.0179s0040 0.5kb downstream 0.5kb downstream 1139 true Scaffold179: 161654-162792 Capsella grandiflora
Cagra.0179s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold179: 161654-162153 Capsella grandiflora
Cagra.0179s0040 1.0kb upstream 1.0kb upstream 1639 true Scaffold179: 162154-163792 Capsella grandiflora
Cagra.0179s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold179: 162793-163792 Capsella grandiflora
Cagra.0179s0040 1.0kb downstream 1.0kb downstream 1639 true Scaffold179: 161154-162792 Capsella grandiflora
Cagra.0179s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold179: 161154-162153 Capsella grandiflora
Cagra.0179s0040 2.0kb upstream 2.0kb upstream 2639 true Scaffold179: 162154-164792 Capsella grandiflora
Cagra.0179s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold179: 162793-164792 Capsella grandiflora
Cagra.0179s0040 2.0kb downstream 2.0kb downstream 2639 true Scaffold179: 160154-162792 Capsella grandiflora
Cagra.0179s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold179: 160154-162153 Capsella grandiflora
Cagra.0179s0040 5.0kb upstream 5.0kb upstream 5639 true Scaffold179: 162154-167792 Capsella grandiflora
Cagra.0179s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold179: 162793-167792 Capsella grandiflora
Cagra.0179s0040 5.0kb downstream 5.0kb downstream 5639 true Scaffold179: 157154-162792 Capsella grandiflora
Cagra.0179s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold179: 157154-162153 Capsella grandiflora
Cagra.0179s0040 10.0kb upstream 10.0kb upstream 10639 true Scaffold179: 162154-172792 Capsella grandiflora
Cagra.0179s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold179: 162793-172792 Capsella grandiflora
Cagra.0179s0040 10.0kb downstream 10.0kb downstream 10639 true Scaffold179: 152154-162792 Capsella grandiflora
Cagra.0179s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold179: 152154-162153 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379167 5261 Brassicaceae View MSA
123833527 5264 Brassicales-Malvales View MSA
124348843 5266 SBM View MSA
124248046 5268 Malvidae View MSA
124066370 5270 Rosid View MSA
123751196 5271 Pentapetalae View MSA
122788614 5272 Eudicot View MSA
122044188 5273 Angiosperm View MSA
121352324 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain