Gene : Cagra.19193s0001 C. grandiflora v1.1
Defline:  (1 of 8) PF04526 - Protein of unknown function (DUF568) (DUF568) Genomic Order:  1
Name:  ? Cagra.19193s0001 Secondary Identifier:  ? PAC:28912325
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.19193s0001 0.5kb upstream 0.5kb upstream 1109 true Scaffold19193: 795-1903 Capsella grandiflora
Cagra.19193s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold19193: 795-1294 Capsella grandiflora
Cagra.19193s0001 0.5kb downstream 0.5kb downstream 636 true Scaffold19193: 1295-1930 Capsella grandiflora
Cagra.19193s0001 0.5kb downstream 0.5kb downstream 27 false Scaffold19193: 1904-1930 Capsella grandiflora
Cagra.19193s0001 1.0kb upstream 1.0kb upstream 1609 true Scaffold19193: 295-1903 Capsella grandiflora
Cagra.19193s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold19193: 295-1294 Capsella grandiflora
Cagra.19193s0001 1.0kb downstream 1.0kb downstream 636 true Scaffold19193: 1295-1930 Capsella grandiflora
Cagra.19193s0001 1.0kb downstream 1.0kb downstream 27 false Scaffold19193: 1904-1930 Capsella grandiflora
Cagra.19193s0001 2.0kb upstream 2.0kb upstream 1903 true Scaffold19193: 1-1903 Capsella grandiflora
Cagra.19193s0001 2.0kb upstream 2.0kb upstream 1294 false Scaffold19193: 1-1294 Capsella grandiflora
Cagra.19193s0001 2.0kb downstream 2.0kb downstream 636 true Scaffold19193: 1295-1930 Capsella grandiflora
Cagra.19193s0001 2.0kb downstream 2.0kb downstream 27 false Scaffold19193: 1904-1930 Capsella grandiflora
Cagra.19193s0001 5.0kb upstream 5.0kb upstream 1903 true Scaffold19193: 1-1903 Capsella grandiflora
Cagra.19193s0001 5.0kb upstream 5.0kb upstream 1294 false Scaffold19193: 1-1294 Capsella grandiflora
Cagra.19193s0001 5.0kb downstream 5.0kb downstream 636 true Scaffold19193: 1295-1930 Capsella grandiflora
Cagra.19193s0001 5.0kb downstream 5.0kb downstream 27 false Scaffold19193: 1904-1930 Capsella grandiflora
Cagra.19193s0001 10.0kb upstream 10.0kb upstream 1903 true Scaffold19193: 1-1903 Capsella grandiflora
Cagra.19193s0001 10.0kb upstream 10.0kb upstream 1294 false Scaffold19193: 1-1294 Capsella grandiflora
Cagra.19193s0001 10.0kb downstream 10.0kb downstream 636 true Scaffold19193: 1295-1930 Capsella grandiflora
Cagra.19193s0001 10.0kb downstream 10.0kb downstream 27 false Scaffold19193: 1904-1930 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332969 5261 Brassicaceae Singleton cluster - no MSA
123773976 5264 Brassicales-Malvales Singleton cluster - no MSA
124350286 5266 SBM View MSA
124249601 5268 Malvidae View MSA
124069237 5270 Rosid View MSA
123742900 5271 Pentapetalae View MSA
122770434 5272 Eudicot View MSA
122050143 5273 Angiosperm View MSA
121311761 5274 Embryophyte View MSA
123349016 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain