Gene : Cagra.1954s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31621:SF1 - DUF679 DOMAIN MEMBRANE PROTEIN 1 Genomic Order:  1
Name:  ? Cagra.1954s0001 Secondary Identifier:  ? PAC:28909638
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1954s0001 0.5kb upstream 0.5kb upstream 1020 true Scaffold1954: 7118-8137 Capsella grandiflora
Cagra.1954s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold1954: 7118-7617 Capsella grandiflora
Cagra.1954s0001 0.5kb downstream 0.5kb downstream 1020 true Scaffold1954: 7618-8637 Capsella grandiflora
Cagra.1954s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1954: 8138-8637 Capsella grandiflora
Cagra.1954s0001 1.0kb upstream 1.0kb upstream 1520 true Scaffold1954: 6618-8137 Capsella grandiflora
Cagra.1954s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold1954: 6618-7617 Capsella grandiflora
Cagra.1954s0001 1.0kb downstream 1.0kb downstream 1520 true Scaffold1954: 7618-9137 Capsella grandiflora
Cagra.1954s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1954: 8138-9137 Capsella grandiflora
Cagra.1954s0001 2.0kb upstream 2.0kb upstream 2520 true Scaffold1954: 5618-8137 Capsella grandiflora
Cagra.1954s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold1954: 5618-7617 Capsella grandiflora
Cagra.1954s0001 2.0kb downstream 2.0kb downstream 2520 true Scaffold1954: 7618-10137 Capsella grandiflora
Cagra.1954s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold1954: 8138-10137 Capsella grandiflora
Cagra.1954s0001 5.0kb upstream 5.0kb upstream 5520 true Scaffold1954: 2618-8137 Capsella grandiflora
Cagra.1954s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold1954: 2618-7617 Capsella grandiflora
Cagra.1954s0001 5.0kb downstream 5.0kb downstream 5520 true Scaffold1954: 7618-13137 Capsella grandiflora
Cagra.1954s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold1954: 8138-13137 Capsella grandiflora
Cagra.1954s0001 10.0kb upstream 10.0kb upstream 8137 true Scaffold1954: 1-8137 Capsella grandiflora
Cagra.1954s0001 10.0kb upstream 10.0kb upstream 7617 false Scaffold1954: 1-7617 Capsella grandiflora
Cagra.1954s0001 10.0kb downstream 10.0kb downstream 10520 true Scaffold1954: 7618-18137 Capsella grandiflora
Cagra.1954s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold1954: 8138-18137 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367765 5261 Brassicaceae View MSA
123840032 5264 Brassicales-Malvales View MSA
124349774 5266 SBM View MSA
124249306 5268 Malvidae View MSA
124066141 5270 Rosid View MSA
123749826 5271 Pentapetalae View MSA
122795559 5272 Eudicot View MSA
122046671 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain