Gene : Cagra.1905s0009 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  9
Name:  ? Cagra.1905s0009 Secondary Identifier:  ? PAC:28912118
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1905s0009 0.5kb upstream 0.5kb upstream 2882 true Scaffold1905: 30347-33228 Capsella grandiflora
Cagra.1905s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold1905: 30347-30846 Capsella grandiflora
Cagra.1905s0009 0.5kb downstream 0.5kb downstream 2882 true Scaffold1905: 30847-33728 Capsella grandiflora
Cagra.1905s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold1905: 33229-33728 Capsella grandiflora
Cagra.1905s0009 1.0kb upstream 1.0kb upstream 3382 true Scaffold1905: 29847-33228 Capsella grandiflora
Cagra.1905s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold1905: 29847-30846 Capsella grandiflora
Cagra.1905s0009 1.0kb downstream 1.0kb downstream 3382 true Scaffold1905: 30847-34228 Capsella grandiflora
Cagra.1905s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold1905: 33229-34228 Capsella grandiflora
Cagra.1905s0009 2.0kb upstream 2.0kb upstream 4382 true Scaffold1905: 28847-33228 Capsella grandiflora
Cagra.1905s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold1905: 28847-30846 Capsella grandiflora
Cagra.1905s0009 2.0kb downstream 2.0kb downstream 4382 true Scaffold1905: 30847-35228 Capsella grandiflora
Cagra.1905s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold1905: 33229-35228 Capsella grandiflora
Cagra.1905s0009 5.0kb upstream 5.0kb upstream 7382 true Scaffold1905: 25847-33228 Capsella grandiflora
Cagra.1905s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold1905: 25847-30846 Capsella grandiflora
Cagra.1905s0009 5.0kb downstream 5.0kb downstream 7382 true Scaffold1905: 30847-38228 Capsella grandiflora
Cagra.1905s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold1905: 33229-38228 Capsella grandiflora
Cagra.1905s0009 10.0kb upstream 10.0kb upstream 12382 true Scaffold1905: 20847-33228 Capsella grandiflora
Cagra.1905s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold1905: 20847-30846 Capsella grandiflora
Cagra.1905s0009 10.0kb downstream 10.0kb downstream 12382 true Scaffold1905: 30847-43228 Capsella grandiflora
Cagra.1905s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold1905: 33229-43228 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381130 5261 Brassicaceae View MSA
123841436 5264 Brassicales-Malvales View MSA
124350672 5266 SBM View MSA
124254642 5268 Malvidae View MSA
124074430 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain