Gene : Cagra.1889s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33122:SF1 - 5B PROTEIN LIKE PROTEIN-RELATED Genomic Order:  2
Name:  ? Cagra.1889s0002 Secondary Identifier:  ? PAC:28908600
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1889s0002 0.5kb upstream 0.5kb upstream 878 true Scaffold1889: 4284-5161 Capsella grandiflora
Cagra.1889s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1889: 4662-5161 Capsella grandiflora
Cagra.1889s0002 0.5kb downstream 0.5kb downstream 878 true Scaffold1889: 3784-4661 Capsella grandiflora
Cagra.1889s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1889: 3784-4283 Capsella grandiflora
Cagra.1889s0002 1.0kb upstream 1.0kb upstream 1378 true Scaffold1889: 4284-5661 Capsella grandiflora
Cagra.1889s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1889: 4662-5661 Capsella grandiflora
Cagra.1889s0002 1.0kb downstream 1.0kb downstream 1378 true Scaffold1889: 3284-4661 Capsella grandiflora
Cagra.1889s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1889: 3284-4283 Capsella grandiflora
Cagra.1889s0002 2.0kb upstream 2.0kb upstream 2378 true Scaffold1889: 4284-6661 Capsella grandiflora
Cagra.1889s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1889: 4662-6661 Capsella grandiflora
Cagra.1889s0002 2.0kb downstream 2.0kb downstream 2378 true Scaffold1889: 2284-4661 Capsella grandiflora
Cagra.1889s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1889: 2284-4283 Capsella grandiflora
Cagra.1889s0002 5.0kb upstream 5.0kb upstream 5378 true Scaffold1889: 4284-9661 Capsella grandiflora
Cagra.1889s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1889: 4662-9661 Capsella grandiflora
Cagra.1889s0002 5.0kb downstream 5.0kb downstream 4661 true Scaffold1889: 1-4661 Capsella grandiflora
Cagra.1889s0002 5.0kb downstream 5.0kb downstream 4283 false Scaffold1889: 1-4283 Capsella grandiflora
Cagra.1889s0002 10.0kb upstream 10.0kb upstream 10378 true Scaffold1889: 4284-14661 Capsella grandiflora
Cagra.1889s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold1889: 4662-14661 Capsella grandiflora
Cagra.1889s0002 10.0kb downstream 10.0kb downstream 4661 true Scaffold1889: 1-4661 Capsella grandiflora
Cagra.1889s0002 10.0kb downstream 10.0kb downstream 4283 false Scaffold1889: 1-4283 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378457 5261 Brassicaceae View MSA
123801875 5264 Brassicales-Malvales View MSA
124299129 5266 SBM View MSA
124244451 5268 Malvidae View MSA
124050575 5270 Rosid View MSA
123743784 5271 Pentapetalae View MSA
122791935 5272 Eudicot View MSA
122047502 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain