Gene : Cagra.2097s0025 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  25
Name:  ? Cagra.2097s0025 Secondary Identifier:  ? PAC:28905535
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2097s0025 0.5kb upstream 0.5kb upstream 2408 true Scaffold2097: 86116-88523 Capsella grandiflora
Cagra.2097s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold2097: 88024-88523 Capsella grandiflora
Cagra.2097s0025 0.5kb downstream 0.5kb downstream 2408 true Scaffold2097: 85616-88023 Capsella grandiflora
Cagra.2097s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold2097: 85616-86115 Capsella grandiflora
Cagra.2097s0025 1.0kb upstream 1.0kb upstream 2908 true Scaffold2097: 86116-89023 Capsella grandiflora
Cagra.2097s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold2097: 88024-89023 Capsella grandiflora
Cagra.2097s0025 1.0kb downstream 1.0kb downstream 2908 true Scaffold2097: 85116-88023 Capsella grandiflora
Cagra.2097s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold2097: 85116-86115 Capsella grandiflora
Cagra.2097s0025 2.0kb upstream 2.0kb upstream 3908 true Scaffold2097: 86116-90023 Capsella grandiflora
Cagra.2097s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold2097: 88024-90023 Capsella grandiflora
Cagra.2097s0025 2.0kb downstream 2.0kb downstream 3908 true Scaffold2097: 84116-88023 Capsella grandiflora
Cagra.2097s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold2097: 84116-86115 Capsella grandiflora
Cagra.2097s0025 5.0kb upstream 5.0kb upstream 6908 true Scaffold2097: 86116-93023 Capsella grandiflora
Cagra.2097s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold2097: 88024-93023 Capsella grandiflora
Cagra.2097s0025 5.0kb downstream 5.0kb downstream 6908 true Scaffold2097: 81116-88023 Capsella grandiflora
Cagra.2097s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold2097: 81116-86115 Capsella grandiflora
Cagra.2097s0025 10.0kb upstream 10.0kb upstream 11908 true Scaffold2097: 86116-98023 Capsella grandiflora
Cagra.2097s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold2097: 88024-98023 Capsella grandiflora
Cagra.2097s0025 10.0kb downstream 10.0kb downstream 11908 true Scaffold2097: 76116-88023 Capsella grandiflora
Cagra.2097s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold2097: 76116-86115 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360775 5261 Brassicaceae View MSA
123829227 5264 Brassicales-Malvales View MSA
124346453 5266 SBM View MSA
124252725 5268 Malvidae View MSA
124068933 5270 Rosid View MSA
123750623 5271 Pentapetalae View MSA
122791820 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain