Gene : Cagra.2175s0019 C. grandiflora v1.1
Defline:  (1 of 5) PF00197 - Trypsin and protease inhibitor (Kunitz_legume) Genomic Order:  19
Name:  ? Cagra.2175s0019 Secondary Identifier:  ? PAC:28895786
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2175s0019 0.5kb upstream 0.5kb upstream 1088 true Scaffold2175: 75091-76178 Capsella grandiflora
Cagra.2175s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold2175: 75091-75590 Capsella grandiflora
Cagra.2175s0019 0.5kb downstream 0.5kb downstream 1088 true Scaffold2175: 75591-76678 Capsella grandiflora
Cagra.2175s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold2175: 76179-76678 Capsella grandiflora
Cagra.2175s0019 1.0kb upstream 1.0kb upstream 1588 true Scaffold2175: 74591-76178 Capsella grandiflora
Cagra.2175s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold2175: 74591-75590 Capsella grandiflora
Cagra.2175s0019 1.0kb downstream 1.0kb downstream 1588 true Scaffold2175: 75591-77178 Capsella grandiflora
Cagra.2175s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold2175: 76179-77178 Capsella grandiflora
Cagra.2175s0019 2.0kb upstream 2.0kb upstream 2588 true Scaffold2175: 73591-76178 Capsella grandiflora
Cagra.2175s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold2175: 73591-75590 Capsella grandiflora
Cagra.2175s0019 2.0kb downstream 2.0kb downstream 2588 true Scaffold2175: 75591-78178 Capsella grandiflora
Cagra.2175s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold2175: 76179-78178 Capsella grandiflora
Cagra.2175s0019 5.0kb upstream 5.0kb upstream 5588 true Scaffold2175: 70591-76178 Capsella grandiflora
Cagra.2175s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold2175: 70591-75590 Capsella grandiflora
Cagra.2175s0019 5.0kb downstream 5.0kb downstream 5588 true Scaffold2175: 75591-81178 Capsella grandiflora
Cagra.2175s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold2175: 76179-81178 Capsella grandiflora
Cagra.2175s0019 10.0kb upstream 10.0kb upstream 10588 true Scaffold2175: 65591-76178 Capsella grandiflora
Cagra.2175s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold2175: 65591-75590 Capsella grandiflora
Cagra.2175s0019 10.0kb downstream 10.0kb downstream 10588 true Scaffold2175: 75591-86178 Capsella grandiflora
Cagra.2175s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold2175: 76179-86178 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372999 5261 Brassicaceae View MSA
123831499 5264 Brassicales-Malvales View MSA
124344591 5266 SBM View MSA
124249668 5268 Malvidae View MSA
124070415 5270 Rosid View MSA
123749279 5271 Pentapetalae View MSA
122795954 5272 Eudicot View MSA
122043570 5273 Angiosperm View MSA
121310150 5274 Embryophyte View MSA
123347719 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain